FC929684

Overview
NameFC929684
Unique NameFC929684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.386e-17
Identity = 52/162 (32.10%), Postives = 93/162 (57.41%), Query Frame = 1
Query:  307 KLSIRRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLH 780
            KL+ ++    R G  + +   +++        +FS  EL+ AT NFS   ++G+GG   VYKG L +G++VA+K+ ++   ++ + +F++E+ I++ ++H N  KLLG  +E  + + V E  PNG+L   L+   ++     W IR +IA+ +A  L YLH
Sbjct:  402 KLNQKKKFFKRNGGLLLQQQLISTVGMVEKTIVFSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKK-SKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLH 562          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 87.8113 bits (216), Expect = 7.386e-17
Identity = 54/138 (39.13%), Postives = 77/138 (55.80%), Query Frame = 1
Query:  388 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGC 789
            QS  K  S  +L  +TN+F   N+IG GG+  VYK  L +G+ VAIK+L+ G   +I  +F +E+  ++   HPN   L G+   +    ++     NGSL   L+   +    LKW  R +IA G A+GLLYLHEGC
Sbjct:  716 QSNDKELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLS-GDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGC 852          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.646e-17
Identity = 50/129 (38.76%), Postives = 72/129 (55.81%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGC 789
            F+  EL  AT+ FS ++++G GG+  VY+G+  +G +VA+KRL         + F +EL +++   H N  +L+GY        +V     NGS+AS L   K  L W  R KIA+G A GL YLHE C
Sbjct:  287 FTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKA-KPALDWNTRKKIAIGAARGLFYLHEQC 414          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.646e-17
Identity = 57/155 (36.77%), Postives = 85/155 (54.84%), Query Frame = 1
Query:  355 PRNLFVNSYNSQSPQ------KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGC 789
            P ++F +    + P+      K FSL ELQ A++ FS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +      +V     NGS+AS L      +  L W  R +IALG A GL YLH+ C
Sbjct:  267 PLDIFFDVPAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHC 421          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.646e-17
Identity = 47/124 (37.90%), Postives = 79/124 (63.71%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHE 783
            +++ATN FS  N +G+G + EVYKG+  NG  VA+KRL++ +  +    F +E  +++ + H N A+LLG+ ++G G  ++ E   N SL   L+  ++  +L W  RYKI  G+A+G+L+LH+
Sbjct:  346 IEAATNKFSKSNKLGEGRFGEVYKGKFSNGTEVAVKRLSKVSGQD-TKKFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFDPEKQGELDWTRRYKIIGGIAQGILHLHQ 468          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.646e-17
Identity = 53/129 (41.09%), Postives = 77/129 (59.69%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHE 783
            F    ++ ATN FS  N+IG+GG+ EV+ G L NG  VAIKRL++ +  +   +F +E+ ++A + H N  KLLG+ +EG   I V E  PN SL   L+    + +L W  RY I  G+  G+LYLH+
Sbjct:  325 FDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASR-QGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIRGITRGILYLHQ 451          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.260e-16
Identity = 55/134 (41.04%), Postives = 76/134 (56.72%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGC 789
            K F+L EL  AT+NFS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +      +V     NGS+AS L    E    L W  R  IALG A GL YLH+ C
Sbjct:  280 KRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHC 413          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 1
Query:  451 ENLIGKGGYAEVYKGRLRNGQLVAIKRL--TRGTADE---IIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGC 789
            EN+IGKG    VYK  + NG +VA+K+L  T+   +E    I  F +E+ I+ ++ H N  KLLGY     + ++L    PNG+L  LL G +  L W  RYKIA+G A+GL YLH  C
Sbjct:  775 ENVIGKGCSGIVYKAEIPNGDIVAVKKLWKTKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLLQGNRN-LDWETRYKIAIGAAQGLAYLHHDC 892          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16
Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD-FLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGC 789
            +++  LQ ATN+FS EN+IG+G    VY+    NG+++AIK++          D FL  +  M+ + HPN   L GY  E G   +V E   NG+L   L+   ++   L W  R K+ALG A+ L YLHE C
Sbjct:  383 YTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVC 515          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.149e-16
Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  358 RNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY-------GMKEKLKWGIRYKIALGVAEGLLYLH 780
            RNL   S NS    +IF+  E+  AT+NF+  NL+G GG+ EV+KG L +G  VA+KR   G  ++ I   ++E+ I+  V H N  KLLG  IE  M + V E  PNG+L   +Y       G+ + L    R  IA   A+GL YLH
Sbjct:  328 RNLL--SINSTGLDRIFTGKEIVKATDNFAKSNLLGFGGFGEVFKGNLDDGTTVAVKRAKLGN-EKSIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLH 473          
The following BLAST results are available for this feature:
BLAST of FC929684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
WAKLH_ARATH7.386e-1732.10Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
PSKR1_ARATH7.386e-1739.13Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y2239_ARATH9.646e-1738.76Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH9.646e-1736.77Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK22_ARATH9.646e-1737.90Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
CRK14_ARATH9.646e-1741.09Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
SERK4_ARATH1.260e-1641.04Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y1341_ARATH1.645e-1642.86Probable LRR receptor-like serine/threonine-protei... [more]
SRF8_ARATH1.645e-1638.35Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
WAKLP_ARATH2.149e-1640.27Wall-associated receptor kinase-like 15 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BA07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929684 ID=FC929684; Name=FC929684; organism=Citrus clementina; type=EST; length=789bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAATAAACACA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAATAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTACTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACAATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGT
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