FC929684

Overview
NameFC929684
Unique NameFC929684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 55/161 (34.16%), Postives = 88/161 (54.66%), Query Frame = 1
Query:  319 RRSSSMREGIDMP-RNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGM--KEKLKWGIRYKIALGVAEGLLYLHEGC 789
            ++ S++ +G+ +P R   V+   S    K F+  E+   T NF  + ++GKGG+  VY G ++  + VA+K L++ ++ +   +F +E+ ++  V H N   L+GY  EG  + +V E  PNG L   L G      + W IR +IAL  A GL YLH GC
Sbjct:  524 KKMSTIVKGLRLPPRTSMVDVTFSNKKSKRFTYSEVVQVTKNF--QRVLGKGGFGMVYHGTVKGSEQVAVKVLSQ-SSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGC 681          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.787e-16
Identity = 49/124 (39.52%), Postives = 79/124 (63.71%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHE 783
            +++ATNNFS    +G GG   V+KGRL +G+ +A+KRL+  T ++   +F +E+ ++A + H N  +LLG+ ++G   I++ E  PN SL  +L+    + +L W  RYKI  G A G+LYLH+
Sbjct:  353 IETATNNFS--ERLGHGGSGHVFKGRLPDGKEIAVKRLSEKT-EQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQ 473          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.252e-16
Identity = 52/133 (39.10%), Postives = 79/133 (59.40%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNG-QLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLY----GMKEKLKWGIRYKIALGVAEGLLYLHEG 786
            FS+YE++SATN+F  + +IG GG+  VYKGR+  G  LVA+KRL   T+++   +F +EL +++ + H +   L+GY   +  M +V E  P+G+L   L+         L W  R +I +G A GL YLH G
Sbjct:  513 FSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRL-EITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTG 644          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.252e-16
Identity = 56/156 (35.90%), Postives = 85/156 (54.49%), Query Frame = 1
Query:  319 RRSSSMREGIDMPRNLFVNSYNSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLH 780
            RRS+ +R  +   R L   + NS      F   E++ AT+ FS +  +G G Y  VY+G+L+N + VAIKRL R    E +   ++E+ +++ V HPN  +LLG  IE G   +V E  PNG+L+  L   +   L W +R  +A   A+ + YLH
Sbjct:  309 RRSTPLRSHLSAKRLLSEAAGNSSVA--FFPYKEIEKATDGFSEKQKLGIGAYGTVYRGKLQNDEWVAIKRL-RHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLH 461          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.166e-16
Identity = 52/136 (38.24%), Postives = 75/136 (55.15%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIV-LELSPNGSLASLLYGMK--------EKLKWGIRYKIALGVAEGLLYLHE 783
            I    EL+ AT++F   +LIG+G Y  VY G L N    AIK+L      +   +FL+++ +++ + H N  +LLGY ++G   I+  E + NGSL  +L+G K          L W  R KIA+G A GL YLHE
Sbjct:   60 IIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPD--NEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHE 193          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.166e-16
Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHE 783
            F    +++AT+NF   N +G GG+  VYKG   NG  VA KRL++  +D+   +F +E+ ++A + H N   LLG+ +EG   I V E  PN SL   L+    + +L W  R+ I  G+  G+LYLH+
Sbjct:  351 FDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSK-PSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQ 478          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.166e-16
Identity = 52/140 (37.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKG----------RLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGM-KEKLKWGIRYKIALGVAEGLLYLHE 783
            K F+  EL++AT NF  +NL+G+GG+  V+KG          R  +G +VA+K+L +    +   ++L+E+  +  + HPN   L+GY  EG    +V E  P GSL + L+    + L W IR K+A+G A+GL +LHE
Sbjct:   72 KAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQL-KPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHE 210          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.067e-15
Identity = 55/141 (39.01%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  373 NSYNSQ-SPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEG 786
            N YNS     + FSL ELQ AT NF    +IG GG+  VY G L +G  VA+KR     +++ I +F +E+ +++ + H +   L+GY  E   M +V E   NG     LYG     L W  R +I +G A GL YLH G
Sbjct:  502 NFYNSTLGLGRYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKR-GNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNLAPLTWKQRLEICIGSARGLHYLHTG 641          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.067e-15
Identity = 50/131 (38.17%), Postives = 73/131 (55.73%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEG 786
            + F   E+  ATN F   +L+G GG+  VYKG L +G  VA+KR     +++ +A+F +E+ +++ + H +   L+GY  E   M +V E   NG L S LYG     L W  R +I +G A GL YLH G
Sbjct:  496 RCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKR-GNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTG 625          
BLAST of FC929684 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.393e-15
Identity = 56/138 (40.58%), Postives = 78/138 (56.52%), Query Frame = 1
Query:  397 QKIFSLY---ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL--TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEKLK-WGIRYKIALGVAEGLLYLHEGC 789
            +K+ ++Y   EL+  T +FS+  +IGKGG+  VY G L NG+ VA+K L   +G+A+    DF++E+  M+   H N   LLG+  EG    IV E   NGSL   +   K   +     Y IALG+A GL YLH GC
Sbjct:  482 KKLLNMYTYAELKKITKSFSY--IIGKGGFGTVYGGNLSNGRKVAVKVLKDLKGSAE----DFINEVASMSQTSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQFMSRNKSLTQDVTTLYGIALGIARGLEYLHYGC 613          
The following BLAST results are available for this feature:
BLAST of FC929684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
RLK7_ARATH3.666e-1634.16Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
CRK13_ARATH4.787e-1639.52Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y5389_ARATH6.252e-1639.10Probable receptor-like protein kinase At5g38990 OS... [more]
WAKLO_ARATH6.252e-1635.90Wall-associated receptor kinase-like 14 OS=Arabido... [more]
Y2706_ARATH8.166e-1638.24Probable receptor-like protein kinase At2g47060 OS... [more]
CRK21_ARATH8.166e-1637.98Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
APK2A_ARATH8.166e-1637.14Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y4391_ARATH1.067e-1539.01Probable receptor-like protein kinase At4g39110 OS... [more]
THE1_ARATH1.067e-1538.17Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
Y5393_ARATH1.393e-1540.58Probable receptor-like protein kinase At5g39030 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BA07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929684 ID=FC929684; Name=FC929684; organism=Citrus clementina; type=EST; length=789bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAATAAACACA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAATAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTACTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACAATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGT
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