FC929692

Overview
NameFC929692
Unique NameFC929692
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.799e-50
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = -1 
Query:  409 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 597
            PITGTGINPARSFGAAVIYN +KAWDDQWIFWVGPF+GA +AAFYHQ++LRA A+KA GS RS
Sbjct:  220 PITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKAYGSVRS 282

HSP 2 Score: 88.9669 bits (219), Expect = 3.799e-50
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN L+DGYN G G+GAEIIGTFVLVYTVFSATD KR+ARDSH+PVLAPLP
Sbjct:  157 ANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLP 206

HSP 3 Score: 33.4982 bits (75), Expect = 3.799e-50
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGF+VFMVHLATIP
Sbjct:  206 PIGFSVFMVHLATIP 220
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.398e-49
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = -1 
Query:  409 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 597
            PITGTGINPARS GAA+IYNK+KAWD  WIFWVGPF GA +AAFYHQ++LRA AIKALGSFRS
Sbjct:  220 PITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALGSFRS 282

HSP 2 Score: 87.8113 bits (216), Expect = 2.398e-49
Identity = 43/50 (86.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN L+DGY+ GTG+ AEIIGTFVLVYTVFSATD KRSARDSHVPVLAPLP
Sbjct:  157 ANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 206

HSP 3 Score: 33.113 bits (74), Expect = 2.398e-49
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVF+VHLATIP
Sbjct:  206 PIGFAVFIVHLATIP 220
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.332e-48
Identity = 49/65 (75.38%), Postives = 55/65 (84.62%), Query Frame = -1 
Query:  403 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 597
            P+TGTGINPARS GAAV+YN  KAW DQWIFWVGPFIGA +AA YHQ +LRA+A +  GSFRSNA
Sbjct:  220 PVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA-RGYGSFRSNA 283

HSP 2 Score: 91.6633 bits (226), Expect = 3.332e-48
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            ANELA GY+KGTGL AEIIGTFVLVYTVFSATD KR+ARDSHVPVLAPLP
Sbjct:  157 ANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 206

HSP 3 Score: 34.6538 bits (78), Expect = 3.332e-48
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVFMVHLATIP
Sbjct:  206 PIGFAVFMVHLATIP 220
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.403e-48
Identity = 57/64 (89.06%), Postives = 58/64 (90.62%), Query Frame = -1 
Query:  406 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 597
            PITGTGINPARSFGAAVIYN EKAWDD WIFWVGPF+GA  AA YHQYILRAAAIKAL SFRSN
Sbjct:  212 PITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALASFRSN 275

HSP 2 Score: 90.1225 bits (222), Expect = 3.403e-48
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN +ADGY+ GT LGAEIIGTFVLVYTVFSATD KRSARDSHVPVLAPLP
Sbjct:  149 ANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 198
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.732e-47
Identity = 50/65 (76.92%), Postives = 54/65 (83.08%), Query Frame = -1 
Query:  403 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 597
            PITGTGINPARS G AV+YN  KAW DQWIFWVGPFIGA +AA YHQ ILRA+A +  GSFRSNA
Sbjct:  223 PITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRASA-RGYGSFRSNA 286

HSP 2 Score: 89.3521 bits (220), Expect = 2.732e-47
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            ANELA GY+ GTGL AEIIGTFVLVYTVFSATD KR+ARDSHVPVLAPLP
Sbjct:  160 ANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 209

HSP 3 Score: 34.6538 bits (78), Expect = 2.732e-47
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVFMVHLATIP
Sbjct:  209 PIGFAVFMVHLATIP 223
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.833e-47
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = -1 
Query:  403 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 597
            PITGTGINPARSFGAAVIYNK K WDD WIFWVGPFIGA +AAFYHQ++LRA+  K+LGSFRS A
Sbjct:  219 PITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRSAA 283

HSP 2 Score: 92.4337 bits (228), Expect = 2.833e-47
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN LADGYN GTGL AEIIGTFVLVYTVFSATD KR+ARDSHVPVLAPLP
Sbjct:  156 ANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 205
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.554e-47
Identity = 50/63 (79.37%), Postives = 54/63 (85.71%), Query Frame = -1 
Query:  409 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 597
            PITGTGINPARS GAAVIYN +KAWDD WIFWVGPFIGA +AA YHQY+LRA+A K LGS  S
Sbjct:  221 PITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASAAK-LGSSAS 282

HSP 2 Score: 90.5077 bits (223), Expect = 3.554e-47
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            ANEL+ GY+KGTGL AEIIGTFVLVYTVFSATD KR+ARDSHVPVLAPLP
Sbjct:  158 ANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 207

HSP 3 Score: 34.6538 bits (78), Expect = 3.554e-47
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVFMVHLATIP
Sbjct:  207 PIGFAVFMVHLATIP 221
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.811e-47
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = -1 
Query:  403 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 597
            PITGTGINPARSFGAAVIYNK K WDD WIFWVGPFIGA +AAFYHQ++LRA+  K+LGSFRS A
Sbjct:  221 PITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRSAA 285

HSP 2 Score: 91.6633 bits (226), Expect = 4.811e-47
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN LADGY+ GTGL AEIIGTFVLVYTVFSATD KRSARDSHVPVLAPLP
Sbjct:  158 ANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 207
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.012e-47
Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = -1 
Query:  403 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 597
            PITGTGINPARS GAAV+YN  KAW DQWIFWVGPFIGA +AA YHQ +LRA+A +  GSFRSNA
Sbjct:  225 PITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA-RGYGSFRSNA 288

HSP 2 Score: 87.0409 bits (214), Expect = 6.012e-47
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            ANE++ GY+ GTGL AEIIGTFVLVYTVFSATD KR+ARDSHVPVLAPLP
Sbjct:  162 ANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 211

HSP 3 Score: 34.6538 bits (78), Expect = 6.012e-47
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVFMVHLATIP
Sbjct:  211 PIGFAVFMVHLATIP 225
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.721e-46
Identity = 48/63 (76.19%), Postives = 52/63 (82.54%), Query Frame = -1 
Query:  409 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 597
            PITGTGINPARS GAAVIYN+ KAW D WIFWVGP IGA +AA YHQY+LRA+A K LGS  S
Sbjct:  226 PITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSSSS 287

HSP 2 Score: 93.5893 bits (231), Expect = 1.721e-46
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            ANEL+DGY+KGTGL AEIIGTFVLVYTVFSATD KR+ARDSHVPVLAPLP
Sbjct:  163 ANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 212

HSP 3 Score: 34.6538 bits (78), Expect = 1.721e-46
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVFMVHLATIP
Sbjct:  212 PIGFAVFMVHLATIP 226
The following BLAST results are available for this feature:
BLAST of FC929692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
PIP26_ARATH3.799e-5082.54Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP25_ARATH2.398e-4982.54Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP25_ORYSJ3.332e-4875.38Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP28_ARATH3.403e-4889.06Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP24_ORYSJ2.732e-4776.92Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP22_ARATH2.833e-4781.54Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP25_MAIZE3.554e-4779.37Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP21_ARATH4.811e-4781.54Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP26_MAIZE6.012e-4776.92Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP23_ORYSJ1.721e-4676.19Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BB03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BB03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929692 ID=FC929692; Name=FC929692; organism=Citrus clementina; type=EST; length=789bp
TTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTAA
TTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAGG
ATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACTT
ATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCCT
TACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTAC
AATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAGC
TTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGAT
CATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGCT
TAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGAG
AATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCAA
CCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCACA
GCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGGA
TGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGGAGTGGTGC
CAAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTANGATCAGTGGCAG
AGAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGT
CCGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCC
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