FC929692

Overview
NameFC929692
Unique NameFC929692
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.809e-46
Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = -1 
Query:  403 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 597
            PITGTGINPARSFGAAVI+NK K WDD WIFWVGPFIGA +AAFYHQ++LRA+  K+LGSFRS A
Sbjct:  219 PITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKSLGSFRSAA 283

HSP 2 Score: 91.2781 bits (225), Expect = 1.809e-46
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN LADGYN GTGL AEIIGTFVLVYTVFSATD KR+ARDSHVPVLAPLP
Sbjct:  156 ANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 205
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.359e-46
Identity = 56/64 (87.50%), Postives = 58/64 (90.62%), Query Frame = -1 
Query:  406 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 597
            PITGTGINPARS GAAVIYN++KAWDD WIFW GPFIGA  AA YHQYILRAAAIKALGSFRSN
Sbjct:  216 PITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALGSFRSN 279

HSP 2 Score: 86.2705 bits (212), Expect = 2.359e-46
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN +A GY+ GT LGAEIIGTFVLVYTVFSATD KR+ARDSHVPVLAPLP
Sbjct:  153 ANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 202
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.541e-44
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = -1 
Query:  427 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 597
            PITGTGINPARS GAA+IYNK+ AWDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:  228 PITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKS 284

HSP 2 Score: 89.7373 bits (221), Expect = 2.541e-44
Identity = 43/50 (86.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN +A GY KG+GLGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLP
Sbjct:  165 ANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLP 214

HSP 3 Score: 33.4982 bits (75), Expect = 2.541e-44
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVF+VHLATIP
Sbjct:  214 PIGFAVFLVHLATIP 228
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.297e-44
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = -1 
Query:  427 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 597
            PITGTGINPARS GAA+IYNK+ AWDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:  229 PITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285

HSP 2 Score: 88.9669 bits (219), Expect = 4.297e-44
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN +A GY KG+GLGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLP
Sbjct:  166 ANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLP 215

HSP 3 Score: 33.4982 bits (75), Expect = 4.297e-44
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVF+VHLATIP
Sbjct:  215 PIGFAVFLVHLATIP 229
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.589e-44
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = -1 
Query:  427 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 597
            PITGTGINPARS GAA+IYNK+ +WDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:  229 PITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285

HSP 2 Score: 89.7373 bits (221), Expect = 5.589e-44
Identity = 43/50 (86.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN +A GY KG+GLGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLP
Sbjct:  166 ANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLP 215

HSP 3 Score: 33.4982 bits (75), Expect = 5.589e-44
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVF+VHLATIP
Sbjct:  215 PIGFAVFLVHLATIP 229
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.946e-43
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = -1 
Query:  427 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 597
            PITGTGINPARS GAA+IYNK+ AW+D WIFWVGPF+GA +AA YHQ I+RA   K+
Sbjct:  231 PITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKS 287

HSP 2 Score: 87.0409 bits (214), Expect = 5.946e-43
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLP
Sbjct:  168 ANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLP 217

HSP 3 Score: 33.4982 bits (75), Expect = 5.946e-43
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVF+VHLATIP
Sbjct:  217 PIGFAVFLVHLATIP 231
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.734e-43
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -1 
Query:  427 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 597
            PITGTGINPARS GAA+I+NK+ AWDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:  228 PITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFKS 284

HSP 2 Score: 88.9669 bits (219), Expect = 7.734e-43
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLP
Sbjct:  165 ANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLP 214

HSP 3 Score: 33.4982 bits (75), Expect = 7.734e-43
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVF+VHLATIP
Sbjct:  214 PIGFAVFLVHLATIP 228
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.006e-42
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -1 
Query:  427 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 597
            PITGTGINPARS GAA+IYNK+ +WDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:  228 PITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284

HSP 2 Score: 88.5817 bits (218), Expect = 1.006e-42
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLP
Sbjct:  165 ANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLP 214

HSP 3 Score: 33.4982 bits (75), Expect = 1.006e-42
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVF+VHLATIP
Sbjct:  214 PIGFAVFLVHLATIP 228
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.006e-42
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -1 
Query:  427 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 597
            PITGTGINPARS GAA+IYNK+ +WDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:  228 PITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284

HSP 2 Score: 88.5817 bits (218), Expect = 1.006e-42
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLP
Sbjct:  165 ANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLP 214

HSP 3 Score: 33.4982 bits (75), Expect = 1.006e-42
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVF+VHLATIP
Sbjct:  214 PIGFAVFLVHLATIP 228
[Close]
BLAST of FC929692 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.307e-42
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = -1 
Query:  427 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 597
            PITGTGINPARS GAA+IYN++ AW+D WIFWVGPFIGA +AA YHQ I+RA   K+
Sbjct:  231 PITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 287

HSP 2 Score: 86.6557 bits (213), Expect = 1.307e-42
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = -2 
Query:  639 ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDXKRSARDSHVPVLAPLP 788
            AN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLP
Sbjct:  168 ANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLP 217

HSP 3 Score: 33.4982 bits (75), Expect = 1.307e-42
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  596 PIGFAVFMVHLATIP 640
            PIGFAVF+VHLATIP
Sbjct:  217 PIGFAVFLVHLATIP 231
The following BLAST results are available for this feature:
BLAST of FC929692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
PIP23_ARATH1.809e-4680.00Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP26_ORYSJ2.359e-4687.50Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP13_ARATH2.541e-4473.68Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP15_ARATH4.297e-4473.68Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH5.589e-4471.93Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP11_ORYSJ5.946e-4371.93Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_ARATH7.734e-4368.42Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_VICFA1.006e-4268.42Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH1.006e-4268.42Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_MAIZE1.307e-4271.93Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BB03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BB03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929692 ID=FC929692; Name=FC929692; organism=Citrus clementina; type=EST; length=789bp
TTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTAA
TTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAGG
ATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACTT
ATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCCT
TACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTAC
AATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAGC
TTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGAT
CATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGCT
TAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGAG
AATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCAA
CCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCACA
GCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGGA
TGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGGAGTGGTGC
CAAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTANGATCAGTGGCAG
AGAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGT
CCGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCC
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