FC929725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.043e-53 Identity = 98/135 (72.59%), Postives = 117/135 (86.67%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+F+L+P++F+P GLIQLHAMRYGT+PI ASTGGLVDTV EGFTGF MG+F+V+C VDP DV ++TTV RALA YG+ A EM++N MAQDLSWKGPAK WE+ LL+L V+GSEPG+DGEEIAPLAKENVATP Sbjct: 474 ADFMLVPSRFEPCGLIQLHAMRYGTIPICASTGGLVDTVTEGFTGFHMGAFNVECATVDPADVQKIATTVERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEKMLLSLGVSGSEPGVDGEEIAPLAKENVATP 608
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.853e-52 Identity = 96/135 (71.11%), Postives = 116/135 (85.93%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+F+L+P++F+P GLIQLHAMRYGTVPI ASTGGLVDTV+EG+TGF MG+F+V+C+ VDP DV + TTV RALA YGT A AEM+KN M+++LSWK PAKKWE LL L +GSEPG++GEEIAPLAKENVATP Sbjct: 473 ADFMLVPSRFEPCGLIQLHAMRYGTVPICASTGGLVDTVKEGYTGFHMGAFNVECDVVDPADVLKIVTTVARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWETLLLGLGASGSEPGVEGEEIAPLAKENVATP 607
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 8.583e-52 Identity = 97/135 (71.85%), Postives = 115/135 (85.19%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+F+L+P++F+P GLIQLHAMRYGTVPIVASTGGLVDTV+EG+TGFQMG+ V+C+ +D DVAA+ TV RAL TY T AL EM+ N MAQDLSWKGPA+ WE+ LL+LEV GSEPG +GEEIAPLAKENV TP Sbjct: 474 ADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGALHVECDKIDSADVAAIVKTVARALGTYATAALREMILNCMAQDLSWKGPARMWEKMLLDLEVTGSEPGTEGEEIAPLAKENVPTP 608
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 8.583e-52 Identity = 99/135 (73.33%), Postives = 115/135 (85.19%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+F+LIP++F+P GLIQLHAMRYGT I ASTGGLVDTV+EG+TGF MG+F+VDCE VDP DV V TTV RALA YGT A EM+KN M+Q+LSWKGPAK WE LL+L VAGSEPG++G+EIAPLAKENVATP Sbjct: 474 ADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGLVDTVKEGYTGFHMGAFNVDCETVDPEDVLKVITTVGRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWETVLLSLGVAGSEPGVEGDEIAPLAKENVATP 608
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.606e-50 Identity = 94/135 (69.63%), Postives = 113/135 (83.70%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+FI++P++F+P GLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP DV A + V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +GEEIAPLAKENVATP Sbjct: 476 ADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPDDVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEGEEIAPLAKENVATP 610
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.515e-48 Identity = 92/135 (68.15%), Postives = 113/135 (83.70%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+FI+IP++F+P GL+QLHAM YGTVPIV+STGGLVDTV+EG+TGF G F V+CE VDP DV ++ TV+RAL TYGTQA+ +++ N MAQ+ SWK PAK WE+ LLNLEV G+ GIDG+EIAPLAKENVATP Sbjct: 469 ADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKEGYTGFHAGPFDVECEDVDPDDVDKLAATVKRALKTYGTQAMKQIILNCMAQNFSWKKPAKLWEKALLNLEVTGNVAGIDGDEIAPLAKENVATP 603
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.675e-47 Identity = 93/135 (68.89%), Postives = 108/135 (80.00%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+FI+IP++F+P GLIQL M YG VPI +STGGLVDTV EG TGF MGSF+V+ E VDP DVAAV + V RAL Y T M++N MAQDLSWKGPAKKWEE LL+L V GS+PGI+GEEIAPLAK+NVATP Sbjct: 431 ADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFNVEFETVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGSQPGIEGEEIAPLAKQNVATP 565
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 8.603e-44 Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+ + +P++F+P GLIQL MRYGT ASTGGLVDTV EG TGF MG SVDC+ V+P DV V+TT++RA+ GT A EM++N M QDLSWKGPAK WE LL L VAGSEPG++GEEIAPLAKENVA P Sbjct: 472 ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVQKVATTLKRAIKIVGTPAYNEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSEPGVEGEEIAPLAKENVAAP 606
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.917e-43 Identity = 86/135 (63.70%), Postives = 101/135 (74.81%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+ + + ++F+P GLIQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM+KN M QDLSWKGPAK WE LL+L VAG EPGI+GEEIAPLAKENVA P Sbjct: 474 ADLLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIIEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAIKVVGTPAYEEMVKNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGIEGEEIAPLAKENVAAP 608
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.283e-43 Identity = 86/140 (61.43%), Postives = 102/140 (72.86%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 Q+ A+ + + ++F+P GLIQL MRYGT + ASTGGLVDT+ EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM+KN M QDLSWKGPAK WE+ LL L V GSEPGI GEEIAPLA ENVA P Sbjct: 464 QMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVCASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVGTPAYQEMVKNCMIQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLAMENVAAP 603 The following BLAST results are available for this feature:
BLAST of FC929725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929725 ID=FC929725; Name=FC929725; organism=Citrus clementina; type=EST; length=651bpback to top |