FC929725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 9.512e-43 Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+ + + ++F+P GLIQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM++N M QDLSWKGPAK WE LL+L VAG EPG++GEEIAPLAKENVA P Sbjct: 471 ADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIIEGKTGFHMGRLSVDCNVVEPADVKKVATTLQRAIKVVGTPAYEEMVRNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGVEGEEIAPLAKENVAAP 605
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSJ (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42 Identity = 85/135 (62.96%), Postives = 101/135 (74.81%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+ + +P++F+P GLIQL MRYGT ASTGGLVDTV EG TGF MG SVDC+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL L VAGS PGI+G+EIAPLAKENVA P Sbjct: 475 ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 609
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=WAXY PE=3 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42 Identity = 85/135 (62.96%), Postives = 101/135 (74.81%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+ + +P++F+P GLIQL MRYGT ASTGGLVDTV EG TGF MG SVDC+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL L VAGS PGI+G+EIAPLAKENVA P Sbjct: 475 ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 609
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_ORYGL (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza glaberrima GN=WAXY PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.165e-42 Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 A+ + +P++F+P GLIQL MRYGT ASTGGLVDTV EG TGF MG SV+C+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL L VAGS PGI+G+EIAPLAKENVA P Sbjct: 475 ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVNCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 609
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSG1_WHEAT (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WAXY PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.052e-41 Identity = 86/140 (61.43%), Postives = 100/140 (71.43%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 421 Q+ A+ + + ++F+P GLIQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V+P DV V TT++RA+ GT A EM+KN M QDLSWKGPAK WE+ LL L V GSEPGI GEEIAPLA ENVA P Sbjct: 476 QMMAGADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVVTTLKRAVKVVGTPAYHEMVKNCMIQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLALENVAAP 615
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_MYXXD (Glycogen synthase OS=Myxococcus xanthus (strain DK 1622) GN=glgA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.189e-14 Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWE 328 A+F L+P++++P GL Q++++RYGTVPIV +TGGLVDTVE G G + + +A+ +RRALA Y + L E + GM +D SW +++E Sbjct: 372 ADFFLMPSRYEPCGLNQMYSLRYGTVPIVRATGGLVDTVEGGLDGNGI--------LFEAFHKSALLAAIRRALALYADPSRLDEFRRRGMEKDFSWGASGRRYE 468
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_THEYD (Glycogen synthase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.212e-13 Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNGMAQDLSWKGPAKKWEE 331 A+ +L+P++++P GL QL AMRYGT+PI TGGL DTVE+ TGF +S +A++ + R + Y Q EM++ M +D SW +KK+ E Sbjct: 386 ADSLLVPSRYEPCGLSQLIAMRYGTIPICRKTGGLSDTVEDKVTGFLFSEYS----------SSALTHAISRFIEIYNNKQKFLEMIREAMKRDFSWSNSSKKYIE 481
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_RHORT (Glycogen synthase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glgA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 2 Query: 5 IRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 376 I A+F+L+P++F+P GL QL+A+RYGT+P+V TGGL D+V G D D A+ + RA+ Y +A L ++ + GM+QD SWK AK++ L V GS G D Sbjct: 368 IEGAADFLLVPSRFEPCGLTQLYALRYGTIPVVRRTGGLADSVSHLDDGPNGTGIVFDHALPD-----ALEWAIGRAMTLYRDKATLNKVRQRGMSQDFSWKRSAKEY------LRVYGSMVGGD 481
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_ANADE (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=glgA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.604e-13 Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 328 +I A+ L+P++F+P GL Q++++RYGTVP+V S GGL DTVE+ F GF G+ E A+ T RRAL + +A +++ GMA+D SW+ A ++E Sbjct: 363 RIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRSVGGLADTVED-FDGFARGTGFRFAEYTP----QALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_ACIBL (Glycogen synthase OS=Acidobacteria bacterium (strain Ellin345) GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13 Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKW 325 +I ++ L+P++++P GL Q++++RYGTVPIV +TGGL DT+E + T G V+ D +D TVR+AL + + A ++M+NGMA+D SW AK++ Sbjct: 364 KIEAGSDMFLMPSRYEPCGLNQIYSLRYGTVPIVRATGGLDDTIENWDPITNRGTGFKFVEYSGEDMLD------TVRKALELFKDKTAWQKLMRNGMARDFSWNTAAKEY 468 The following BLAST results are available for this feature:
BLAST of FC929725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929725 ID=FC929725; Name=FC929725; organism=Citrus clementina; type=EST; length=651bpback to top |