FC929725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOMG (Glycogen synthase 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.026e-12 Identity = 47/112 (41.96%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 20 NFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEE 331 + L+P++F+P GL QL A+ YGTVPIV TGGL DTV EG GF FS D A V+RALA Y + ++M+ GM +D+SW+ A K+EE Sbjct: 373 DMFLMPSRFEPCGLSQLIALSYGTVPIVRRTGGLADTVIDVTANPREG-NGFSFTEFSAD----------ACWDAVQRALAAYRDREGWRKIMRRGMLRDVSWRSAAGKYEE 473
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12 Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 328 +I A+ L+P++F+P GL Q++++RYGTVP+V + GGL DTVE+ F GF G+ E A+ T RRAL + +A +++ GMA+D SW+ A ++E Sbjct: 363 RIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVED-FDGFARGTGFRFSEYTP----QALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_ACICJ (Glycogen synthase OS=Acidiphilium cryptum (strain JF-5) GN=glgA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12 Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 2 Query: 5 IRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKW 325 I+ A+ IL+P++F+P GL QL A RYG +P+V+ GGLVDTV + TG Q G PV A +S +RR A Y + M +N MA D+SW PA+ + Sbjct: 363 IQGGADAILVPSRFEPCGLTQLAAQRYGAIPVVSLVGGLVDTVIDANPVAISAGVATGIQFG----------PVSEAGLSDGLRRTAALYADPDKWSRMQRNAMALDVSWTEPARNY 469
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_POLNA (Glycogen synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=glgA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 325 +I A+ +L+P++F+P GL QL+A+RYGTVP+V GGL DTV + TGF G P AA++ + +A+A +G AL +M GMAQ+ SW A ++ Sbjct: 370 RIMAGADAMLVPSRFEPCGLTQLYALRYGTVPVVRHVGGLADTVVGASEASVQADRATGFMFG----------PATPAALAQALLQAVAAHGQPALWHRLMLRGMAQNFSWTAAASQY 477
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSY1_SOLTU (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.984e-12 Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 331 +I + +L+P++F+P GL QL+AMRYGT+PIV STGGL DTV++ Q G P+ + T++ A+ TY + +M+ GM +D SW+ A ++E+ Sbjct: 517 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPIVHSTGGLRDTVKDFNPYAQEGIGEGTGWTFSPLTSEKLLDTLKLAIGTYTEHKSSWEGLMRRGMGRDYSWENAAIQYEQ 628
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSJ (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.984e-12 Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 331 +I + +L+P++F+P GL QL+AM+YGTVP+V TGGL DTV E F F A P+ + + +R A++TY + +MK GM+ D +W A ++E+ Sbjct: 518 RITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTV-ENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQ 628
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSI (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.984e-12 Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 331 +I + +L+P++F+P GL QL+AM+YGTVP+V TGGL DTV E F F A P+ + + +R A++TY + +MK GM+ D +W A ++E+ Sbjct: 518 RITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTV-ENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQ 628
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSY1_ARATH (Soluble starch synthase, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=At5g24300 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.984e-12 Identity = 40/112 (35.71%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEE 331 +I + +L+P++F+P GL QL+AMRYGT+P+V TGGL DTVE + G+ + P+ ++ + +R A ATY Q+ +M+ GM ++ SW+ A ++E+ Sbjct: 528 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATYREYKQSWEGLMRRGMTRNYSWENAAVQYEQ 639
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_RHIEC (Glycogen synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgA PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.091e-12 Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 26 ILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 325 I+IP++F+P GL QL+A+RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 369 IIIPSRFEPCGLTQLYALRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGMLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA1_METCA (Glycogen synthase 1 OS=Methylococcus capsulatus GN=glgA1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.091e-12 Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 5 IRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 325 I A+ L+P++F+P GL QL++ RYGTVPIV GGL DTVE+ T ++ + +P A + V RALA Y + + K GMA+D SW+ A ++ Sbjct: 363 IEAGADIFLMPSRFEPCGLNQLYSQRYGTVPIVRKVGGLADTVEDA-TPERLAAGQASGIVFEPAKPAFLLEAVYRALALYREPEVWRAVCKCGMAKDFSWRKSASRY 469 The following BLAST results are available for this feature:
BLAST of FC929725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929725 ID=FC929725; Name=FC929725; organism=Citrus clementina; type=EST; length=651bpback to top |