FC929725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_ANASK (Glycogen synthase OS=Anaeromyxobacter sp. (strain K) GN=glgA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.649e-12 Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEE-----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 328 +I A+ L+P++F+P GL Q++++RYGTVP+V + GGL DTVE+ TGF+ ++ A+ T RRAL + +A +++ GMA+D SW+ A ++E Sbjct: 363 RIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVEDFDGVARGTGFRFSEYTPQ----------ALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS3 (Glycogen synthase OS=Synechococcus sp. (strain CC9311) GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.683e-12 Identity = 50/138 (36.23%), Postives = 70/138 (50.72%), Query Frame = 2 Query: 29 LIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 421 L+P++F+P G+ QL AMRYG VP+V GGLVDTV ++ TGF F DPVD + VR A + E+ + GM QD SW A ++++ + EV G EPG D + ++ A P Sbjct: 352 LMPSRFEPCGISQLLAMRYGCVPVVRKVGGLVDTVPPHDPAQQSGTGFCFDRF-------DPVDF--FTALVRSWEAFRHQDSWRELQRRGMRQDYSWARSAMEYDQ--MYREVCGLKEPGPDAAAVEQFSQGQDADP 478
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPS (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.683e-12 Identity = 44/115 (38.26%), Postives = 62/115 (53.91%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMG-SFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 325 QI+ A+ +L+P++F+P GL QL A+RYG VP+VA GGL DTV + TG G FS PV ++ + + A Y A + NGM D+SWK PA+ + Sbjct: 365 QIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS-------PVTADMLTAALTKTRALYADHATWRNLQINGMTTDVSWKNPAQHY 472
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOSL (Glycogen synthase 2 OS=Geobacter sulfurreducens GN=glgA2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.134e-11 Identity = 45/112 (40.18%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 328 ++ L+P++F+P GL QL AMRYGTVP+V TGGL DTV EG TGF F+ D A + RALA Y ++ +M+ GM +D+SW A ++E Sbjct: 372 SDLFLMPSRFEPCGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPREG-TGFTFEDFTAD----------ACWEAIERALAGYRDRESWRRIMRRGMHRDVSWHNAAGRYE 472
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_RHILW (Glycogen synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=glgA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11 Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 26 ILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 325 I+IP++F+P GL QL+ +RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 369 IIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGMLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_RHIE6 (Glycogen synthase OS=Rhizobium etli (strain CIAT 652) GN=glgA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11 Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 26 ILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 325 I+IP++F+P GL QL+ +RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 369 IIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGLLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSY21_ORYSJ (Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.934e-11 Identity = 44/110 (40.00%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 340 A+ +L+P++F+P GL QL+AM YGTVP+V + GGL DTVE + +G EA +D R T + + K GM QDLSW AK +EE LL Sbjct: 638 ADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRT----SWEGLQKRGMMQDLSWDNAAKLYEEVLL 743
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: SSY1_WHEAT (Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.934e-11 Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ--ALAEMMKNGMAQDLSWKGPAKKWEE 331 +I + +L+P++F+P GL QL+AM+YGTVP+V TGGL DTVE F F A P+ V + +R A++T+ + +MK GM +D +W A+++E+ Sbjct: 524 RITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVET-FNPFGAKGEEGTGWAFSPLTVDKMLWALRTAMSTFREHKPSWEGLMKRGMTKDHTWDHAAEQYEQ 634
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.934e-11 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 325 Q+ A+ ++P++F+P GL Q++++RYGTVP+V +TGGL DTV + + + D A++ + RALA Y A +M+ GMAQD SW A+ + Sbjct: 367 QLEAGADIFVMPSRFEPCGLNQMYSLRYGTVPVVRNTGGLADTVVDADPAHLAARDATGIQ-FDEATPQALADALARALALYHDPACWKRLMQAGMAQDFSWGRSAEAY 474
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_RHOP2 (Glycogen synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=glgA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.526e-11 Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMG-SFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 325 QI+ A+ +L+P++F+P GL QL A+RYG VP+VA GGL DTV + TG G FS PV ++ + + A + A + NGM D+SWK PA+ + Sbjct: 365 QIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS-------PVTAQMLAKALTKTAALHADHAAWRNLQINGMTTDVSWKNPAQHY 472 The following BLAST results are available for this feature:
BLAST of FC929725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929725 ID=FC929725; Name=FC929725; organism=Citrus clementina; type=EST; length=651bpback to top |