FC929725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_SYNSC (Glycogen synthase OS=Synechococcus sp. (strain CC9605) GN=glgA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.628e-11 Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 2 Query: 29 LIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 421 L+P++F+P G+ QL+AMRYG+VP+V GGLVDTV G+ F D +PVD + VR A + E+ K GM QD SW A ++ L+ +V G EP D + ++ A P Sbjct: 352 LMPSRFEPCGISQLYAMRYGSVPVVRKVGGLVDTVPPHIPAADSGTGFCFD--RFEPVDF--YTALVRAWEAFRHRDSWTELQKRGMNQDYSWDRSAVDYD--LMYKDVCGIKEPTPDAALVEQFSQGQAADP 478
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_THIDA (Glycogen synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgA PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.351e-11 Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 316 QI A+ L+P++F+P GL Q++++RYGT+PIV TGGL DT+ + + S + D DVA VRRALA Y +L + + GM W+ A Sbjct: 372 QIEAGADMFLMPSRFEPCGLNQMYSLRYGTLPIVFKTGGLADTIVD-TNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRESA 476
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPB (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.351e-11 Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = 2 Query: 5 IRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEVA 355 I+ A+ +L+P++F+P GL QL A+RYG VP+VA GGL DTV + + + PV ++ + + A Y +A + ++ NGM D+SW+ PA+ + + +L A Sbjct: 366 IQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLSDTVVDA-NEMAIAAGVATGVQFSPVTGDMLAAALSKTRALYADRAAWQALQHNGMTADVSWRNPAQHYAQLYRSLLAA 482
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOSL (Glycogen synthase 1 OS=Geobacter sulfurreducens GN=glgA1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.351e-11 Identity = 40/114 (35.09%), Postives = 66/114 (57.89%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 331 +I ++F ++P+ F+P GL Q++++RYGT+PIV +TGGL D+V E+ TG +S D +A+ V T RR A+A ++ N MA+ +W+ A ++EE Sbjct: 373 RIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGFKFWSHDADALFDTVGWTVHTWYRR------KDAMAALIGNAMAKRFTWEDSAARYEE 480
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_XANCP (Glycogen synthase OS=Xanthomonas campestris pv. campestris GN=glgA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 325 A+F+L+P++F+P GL Q++A R+G +PI +TGGL+DTV++G TGF S + A+ + RA T+ +L M+ M + W KK+ Sbjct: 363 ADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQQASAE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_XANC8 (Glycogen synthase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glgA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 17 ANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 325 A+F+L+P++F+P GL Q++A R+G +PI +TGGL+DTV++G TGF S + A+ + RA T+ +L M+ M + W KK+ Sbjct: 363 ADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQQASAE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_SYNPW (Glycogen synthase OS=Synechococcus sp. (strain WH7803) GN=glgA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 2 Query: 29 LIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 421 L+P++F+P G+ QL+AMRYG VP+V GGLVDTV ++ TGF F +PVD + VR A ++ E+ + GM QD SW A +++ + +V G EP D + ++ A P Sbjct: 352 LMPSRFEPCGISQLYAMRYGCVPVVRKVGGLVDTVPPHDPRQKSGTGFCFDRF-------EPVDF--YTALVRAWEAFRHPESWKELQRRGMEQDYSWARSALEYDR--MYRDVCGLKEPSPDAAAVEQFSQGQEADP 478
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPT (Glycogen synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD--PVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 346 QI+ A+ +L+P++F+P GL QL A+RYG VP+VA GGL DTV + +M + + V PV A+ + A + A + NGM D+SWK PA+ + + +L Sbjct: 365 QIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD---ANEMATATGVATGVQFAPVTTDALIKAFGKTRALFADVVAWRNLQINGMTTDVSWKNPAQHYAKLYRDL 479
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPA (Glycogen synthase OS=Rhodopseudomonas palustris GN=glgA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 2 Query: 2 QIRPKANFILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD--PVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 346 QI+ A+ +L+P++F+P GL QL A+RYG VP+VA GGL DTV + +M + + V PV A+ + A + A + NGM D+SWK PA+ + + +L Sbjct: 365 QIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD---ANEMATATGVATGVQFAPVTTDALIKAFGKTRALFADVVAWRNLQINGMTTDVSWKNPAQHYAKLYRDL 479
BLAST of FC929725 vs. ExPASy Swiss-Prot
Match: GLGA_RHILO (Glycogen synthase OS=Rhizobium loti GN=glgA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 26 ILIPTKFKPWGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEE 331 I+IP++F+P GL QL+ +RYG VP+VA TGGL DT+ + + + P + A+ +RR + Y A E + + GM D+SW A+K+ E Sbjct: 369 IIIPSRFEPCGLTQLYGLRYGCVPVVARTGGLADTIIDANEAAMAAGVATGLQFA-PNNGGAMLHAIRRLVDAYADPAAFETIQRQGMKADVSWDKSAEKYLE 470 The following BLAST results are available for this feature:
BLAST of FC929725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929725 ID=FC929725; Name=FC929725; organism=Citrus clementina; type=EST; length=651bpback to top |