FC929731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.740e-13 Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 82 SNRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 S RL KEL+ + G +N+ +W+ + G T+Y+ +T+ L +DFP YP AP V FL HP++ G ICLDIL D WS V ++ +SI S+L Sbjct: 34 SKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSC-FHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLL 141
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.740e-13 Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 157 NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI-YSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +L RW+ + G P T Y N FEL + P +YP++ P + F+ HP+I + G ICLD+L SWS T+ SVC SI+++LS Sbjct: 29 DLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKI-FHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLS 112
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.740e-13 Identity = 44/125 (35.20%), Postives = 65/125 (52.00%), Query Frame = 1 Query: 79 ASNRLQKELVEWQVNPPAGFKHKVTD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLS 408 AS LQK+L + +P GF + D N+ W + + G P TLY F + FP++YP P V F HP++YS+G +C+ IL+ + W+P TV S+ +SI+SMLS Sbjct: 5 ASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDM-WHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLS 128
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.740e-13 Identity = 48/130 (36.92%), Postives = 73/130 (56.15%), Query Frame = 1 Query: 85 NRLQKELVEWQVNPPAGFKHKV--TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYS-NGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVK--QRPADNDRYVKN 459 +R+QKEL + + N + +DNL R + G GT Y TF++ + P+ YP E P++ F HP+I S +G ICLDIL D WSPA+T+ + +SI ++LS+ K Q ++Y+KN Sbjct: 5 SRIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKV-WHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKN 133
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.740e-13 Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 154 DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADN--DRYVKNCRNGRSPKETRW 495 DNL+ + + + G + Y + FEL++ P+ YPMEAP+V FL HP+I G ICLD+L +WSPA+ + +V +SI ++L+S A++ + ++KN G K W Sbjct: 30 DNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKI-YHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKN-EQGAKAKAREW 143
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVTDNLQRWI-IEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 411 R+ KE P G K + ++ R+ + + G + + TF+L++ PE YPM AP+V F+ HP++ +G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI-YHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSA 114
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 39/121 (32.23%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 91 LQKELVEWQVNPPAGFKHKVTDN--LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLS 408 L+++L E NP GF + D+ L RW + + G P TLY F+ + FP+ YP+ P++ F+ HP++ NG +C+ IL+ + W P TV ++ IS++SML+ Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI-WHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLA 129
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 39/121 (32.23%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 91 LQKELVEWQVNPPAGFKHKVTDN--LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLS 408 L+++L E NP GF + D+ L RW + + G P TLY F+ + FP+ YP+ P++ F+ HP++ NG +C+ IL+ + W P TV ++ IS++SML+ Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI-WHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLA 129
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 39/121 (32.23%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 91 LQKELVEWQVNPPAGFKHKVTDN--LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD-------------SWSPAMTVSSVCISILSMLS 408 L+++L E NP GF + D+ L RW + + G P TLY F+ + FP+ YP+ P++ F+ HP++ NG +C+ IL++ W P TV ++ IS++SML+ Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI-WHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLA 129
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 39/121 (32.23%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 91 LQKELVEWQVNPPAGFKHKVTDN--LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLS 408 L+++L E NP GF + D+ L RW + + G P TLY F+ + FP+ YP+ P++ F+ HP++ NG +C+ IL+ + W P TV ++ IS++SML+ Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI-WHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLA 129 The following BLAST results are available for this feature:
BLAST of FC929731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929731 ID=FC929731; Name=FC929731; organism=Citrus clementina; type=EST; length=767bpback to top |