FC929731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.982e-16 Identity = 55/147 (37.41%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 28 EAMTSSSAPSRKALSK------IASNRLQKELVEWQVNPP----AGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPAD 438 E T S+ ++SK ++ R+QKEL + ++PP AG K DN+ W + G PG++Y F L + F YP + P+V F H +I S G ICLDIL D+WSPA+T+S V +SI S+L+ PAD Sbjct: 25 EGSTPKKKESKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKG---DNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC----NPAD 163
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16 Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKHKVT-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +AS R+ KEL + Q +PP T D++ +W + G + +A F + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+TVS V +SI S+L+ Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKV-YHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLT 111
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16 Identity = 48/111 (43.24%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+QKEL + +PPA V D+L W + G P + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16 Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +AS R+ KEL + Q +PP V +++ W + G + YA F + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16 Identity = 55/141 (39.01%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 28 EAMTSSSAPSRKALSKIASNRLQKELVEWQVNPP----AGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPAD 438 E+ S S S+ L ++ R+QKEL + ++PP AG K DN+ W + G PG++Y F L + F YP + P+V F H +I S G ICLDIL D+WSPA+T+S V +SI S+L+ PAD Sbjct: 33 ESKVSMSKNSK--LLSTSAKRIQKELADITLDPPPNCSAGPKG---DNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC----NPAD 163
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.020e-15 Identity = 44/115 (38.26%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +S A RL ++ Q +PPAG V DN+ W + G T + + TF L + F E YP + PQV F+ HP++Y+ G +CLDIL + WSP V++V SI S+L+ Sbjct: 1 MSTAARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEM-FHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLN 114
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.020e-15 Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTV 420 +S A RL ++ Q +PP+G + DN+ +W + G T + + TF L + F E YP + PQV F+ HP++Y++G +CLDIL + WSP VSS+ S+ S+L+ + Sbjct: 1 MSTPARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEM-FHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNI 118
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PP G ++N + +W + G GT + + TF+L ++F E YP + P V FL HP++Y++G ICLDIL + WSP VSS+ SI S+L Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLL 113
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PP G ++N + +W + G GT + + TF+L ++F E YP + P V FL HP++Y++G ICLDIL + WSP VSS+ SI S+L Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLL 113
BLAST of FC929731 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PP G ++N + +W + G GT + + TF+L ++F E YP + P V FL HP++Y++G ICLDIL + WSP VSS+ SI S+L Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLL 113 The following BLAST results are available for this feature:
BLAST of FC929731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929731 ID=FC929731; Name=FC929731; organism=Citrus clementina; type=EST; length=767bpback to top |