FC929733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 289.656 bits (740), Expect = 1.507e-77 Identity = 141/251 (56.18%), Postives = 171/251 (68.13%), Query Frame = 3 Query: 138 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGG--WRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQ 872 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ R REIAAF AQT HETTGG W AP G YAWGYC+ E++PPS YC + NYPC GK Y+GRGP+QL+WNYNY +C ++DP +SFKSA WFWMT Q PKPSCH VI W PS++D AGR GYG+ TNIINGG+ECG+GWN V +RIGF+ +C G+ G NLDCY+Q Sbjct: 43 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLL--SSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQ 290
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.570e-77 Identity = 141/263 (53.61%), Postives = 176/263 (66.92%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHGTD--GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 CG G C + G T GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FP FG SG+ T R REIAAFFAQT HETTGGW AP G YAWGYC++ E P YC + +PC KY+GRGPIQ++ NYNY C ATDPV+SFKSA+WFWMT Q PKPSCH+VI W+PS+ D A RLPG+G+ TNIINGG+ECG+G + V++RIGF+ +C G+ PG NLDC +Q+ Sbjct: 54 CGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQR 313
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 288.886 bits (738), Expect = 2.570e-77 Identity = 141/261 (54.02%), Postives = 174/261 (66.67%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 CG G C + +G + GG L +IS + F ++L +RND C + FYTYDAF+ AAKAFP F N G+ + REIAAF QT HETTGGW AP G YAWGYCF+ E +P S YC + +PC +YYGRGPIQ++WNYNY +C ATDPV+SFK+A+WFWMT Q PKPSCH+VIT W PS+ D AGRLPGYG TNIINGG+ECG+G + V++RIGF+ +C FGI G NLDCY Q+ Sbjct: 51 CGDG--CQSQCSG-SSGGGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNP-STYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLV--ATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQR 305
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.276e-76 Identity = 137/262 (52.29%), Postives = 172/262 (65.65%), Query Frame = 3 Query: 105 CGSGV-VCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 CG+ CG + G++G++I+R MF D+L +RN+ CP +GFYTYDAFI AAKAFP FG +G+ T R REIAAF AQT HETTGGW AP G YAWGYC++ E P YC + +PC KYYGRGPIQ+++NYNY + ATD V+SFK+A WFWMT Q PKPSCH VIT W PS D +AGRLPG+G+ TNIINGG+ECG+G V++RIGF+ +C + G NLDC +Q+ Sbjct: 44 CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQA--GKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQR 303
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.847e-76 Identity = 138/264 (52.27%), Postives = 174/264 (65.91%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHGTD---GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 CGSG C + G G GG+LG IS MF+ +L +RN+ C + FY+Y+AFI AA++FP FG SG+ R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY C ATDPV+SFK+A+WFWMT Q PKPSCH+VI W PS+ D A RLPG+G+ TNIINGG+ECG+G ++ V++RIGF+ +C G+ PG NLDC +Q+ Sbjct: 57 CGSGN-CQSQCPGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLV--ATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQR 317
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 8.268e-76 Identity = 143/271 (52.77%), Postives = 175/271 (64.58%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 CG G C + +G G +DG +G I+ R++FE LL +RND CPARGFYTY+AF+ AA AFPAFG +GN R RE+AAF QT HETTGGW AP G ++WGYCF E +PPS YC + +PC KYYGRGPIQL++N+NY ATD +SFK+A+WFWMT Q KPS H+VIT W PS D AGR PGYG+ TNI+NGG+ECG G +D V NRIGF+ +CG FGI G NLDCY+Q+ Sbjct: 63 CGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNY--GPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQR 327
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 4.104e-75 Identity = 139/262 (53.05%), Postives = 172/262 (65.65%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 CG G C + G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY C ATD V+SFKSAIWFWMT Q PKPSCH+VIT W+PS D A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PG NLDC +Q+ Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLV--ATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQR 307
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 9.142e-75 Identity = 133/247 (53.85%), Postives = 166/247 (67.21%), Query Frame = 3 Query: 147 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 G G++ IIS MF+ +L +RND C + FYTY+AFI AA++F FG +G+ T R RE+AAFFAQT HETTGGW AP G YAWGYC++ E P YC + +PC KYYGRGPIQ+++NYNY C AT+ V+SFKSAIWFWMTAQ PKPSCH+VIT W PSA D A RLPGYG+ TNIINGG+ECG G + V++RIGF+ +C G+ PG N+DC +Q+ Sbjct: 79 GPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLV--ATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGNQK 323
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 9.142e-75 Identity = 134/248 (54.03%), Postives = 167/248 (67.34%), Query Frame = 3 Query: 147 GTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY C ATD ++SFKSAIWFWMT Q PKPSCH+VIT W+PS D A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PG NLDC +Q+ Sbjct: 60 GGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLV--ATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQR 305
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74 Identity = 137/262 (52.29%), Postives = 171/262 (65.27%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T R REIAAF AQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY C ATDPV+SFKSAIWFWMT Q PKPSCH+VIT W+PS D A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PG NLDC +Q+ Sbjct: 53 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLV--ATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQR 311 The following BLAST results are available for this feature:
BLAST of FC929733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929733 ID=FC929733; Name=FC929733; organism=Citrus clementina; type=EST; length=876bpback to top |