FC929733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 258.455 bits (659), Expect = 3.720e-68 Identity = 126/250 (50.40%), Postives = 157/250 (62.80%), Query Frame = 3 Query: 147 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS--PYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 G+ G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + RE+AAF AQT HETTGGW AP G YAWGYCF E + YC + +PC KYYGRGPIQL++N+NY A+D +SF +A WFWMT Q PKPSCH V T +W PSA+D AGR+PGYG+ TNIINGG+ECG G +D V +RIGF+ +C G+ NLDCY Q+ Sbjct: 75 GSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY--GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQR 322
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.563e-66 Identity = 121/238 (50.84%), Postives = 158/238 (66.39%), Query Frame = 3 Query: 165 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWN-DAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 +G II+R MFE +L +R D C FYTYDAFI+AA FP FG +GN+ R RE+AAFF QT HETTGGW AP G +AWGYC ++EI+P P YYGRGPIQLT YNY ++DPV++F++AIWFWMTAQ PKPSCH+VIT++W PS +D ++GRLPGYG+ TNIINGG ECG+G++ D ++R+G++ +C F + G N+ C Q+ Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP----------PYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLV--SSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQK 251
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 7.757e-66 Identity = 121/243 (49.79%), Postives = 151/243 (62.14%), Query Frame = 3 Query: 147 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HET GG G + GYCF+ +I +YYGRGPIQLT NY R ATDP++SF++AIWFWMTAQ KPSCH VI +W PS D A R+PGYG+ TNIINGG+EC G N AV +RIGF+ +CG + G NLDC +Q+ Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQK 248
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.850e-65 Identity = 120/243 (49.38%), Postives = 148/243 (60.91%), Query Frame = 3 Query: 147 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HET GG G + GYCF+ +I +YYGRGPIQLT NY R ATDP++SFK+AIWFWMT Q KPSCH VI +W PS D A R+PGYG+ TNIING ECG G N A +RIGF+ +CG + G NLDC +Q+ Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQK 248
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.463e-64 Identity = 124/243 (51.03%), Postives = 155/243 (63.79%), Query Frame = 3 Query: 147 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HETTGG A G +A GYCF+ E + +YGRGPIQLT NY ATD +SFK+AIWFWMTAQ KPSCH+VIT +W PSA D +A R PGYG+ TNIINGGIECG+G N V +RIGF+ +C + PG NLDCY Q+ Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQMG----------SGFYGRGPIQLTGQSNY--DLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQR 242
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 7.260e-64 Identity = 127/257 (49.42%), Postives = 147/257 (57.20%), Query Frame = 3 Query: 108 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGW-NDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 G G G G G G L II MF+D+L YRND +CPA GFYTY+AFI AAK FP FGN+G++ MR REIAAF QT HET G W A G +Y WGYC + NYNY C TDP ++FK+A+WFWMT Q PKPSCH VIT+ W PSA D AGR+PGYG+ TNIINGGIECGQG N+A NRIGF+ T+C G G NLDCY Q+ Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM------------------------------NYNYGLCGDDLNLPLLQEPELVE--TDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQR 290
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 2.112e-63 Identity = 129/262 (49.24%), Postives = 159/262 (60.69%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEI----SPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 C + + +G G +G +I++ +F +LP R++ +CPARGFYTYDAFI AA +FPAFG SG + RE+AAFF QT HETTGG R + ++ WGYCF EI SPP YYGRGPIQLT NY +TD V+SFK+AIWFWMTAQ KPSCH+VI W PSA D AGR+PGYG+ TNIINGGIECG G NDA +RIG++ +C G G NLDCY+Q+ Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-------------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLV--STDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQR 257
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 6.146e-63 Identity = 120/237 (50.63%), Postives = 149/237 (62.87%), Query Frame = 3 Query: 165 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HETTGG A + GYCF+ + +YYGRGPIQLT NY + ATD +SFK+AIWFWMT Q KPS H+VI W PSA D A R+PGYG+ TNIINGGIECG G NDAV +RIG++ +CG + PG NLDCY+Q+ Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-----------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLV--ATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQR 248
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 5.203e-62 Identity = 112/250 (44.80%), Postives = 152/250 (60.80%), Query Frame = 3 Query: 141 GHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNL---NYPC-RGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 G+ + I+S +++ L +++D CPARGFYTY +F+ AA FP F +G R RE+AAF AQ HETTGGW AP G YAWG C+ EI+P S YC+ +PC GK Y+GRGPIQ++WN+NY +D ++F++A+WFWMT + KPSCH+V+ E++P DV A R G+GL TNI+NGG+EC + + V NRIGF+ +C G+ G NLDC HQQ Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSD--IAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQ 288
BLAST of FC929733 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.977e-61 Identity = 122/243 (50.21%), Postives = 150/243 (61.73%), Query Frame = 3 Query: 147 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQ 875 GT +G I++ ++F+ +L RND RC A FYTYDAFI AA +FP FG +G++T R +EIAAFF QT HETTGG +P G YA GYCF+ E + YYGRGPIQLT NY ATD +SFK+AIWFWMT Q KPSCH+VIT W PSA D +A R+PGYG+ TNIINGGIECG+G N V +RIG++ + PG NLDCY+Q+ Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLREGNQMG----------NGYYGRGPIQLTGQSNY--DLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQR 249 The following BLAST results are available for this feature:
BLAST of FC929733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929733 ID=FC929733; Name=FC929733; organism=Citrus clementina; type=EST; length=876bpback to top |