FC929743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.464e-44 Identity = 93/206 (45.15%), Postives = 130/206 (63.11%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASKANTKKPCC 753 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+T+K QIWDTAGQER+R ITS+YYRGA G +VYDVT +F NV +WL+E+ +A + +++GNK+D+ + V A+ +A+ G+ F+ETSA A NVE+AF T+ +I K A +N K + G N+ CC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI------KERMGSSIATNNTKASVNVSPGHGVSNNSSGGCC 203
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 7.615e-44 Identity = 87/183 (47.54%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 687 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +HA +++ M++GNK D+ R V+ E + A G+ F+ETSA INVE AF T+ +I + KK L P S+ Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK-LEGNSPQGSS 186
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 7.615e-44 Identity = 87/183 (47.54%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 687 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +HA +++ M++GNK D+ R V+ E + A G+ F+ETSA INVE AF T+ +I + KK L P S+ Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK-LEGNSPQGSS 186
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 7.615e-44 Identity = 89/178 (50.00%), Postives = 125/178 (70.22%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE 672 YD LFK++LIGDSGVGKS LL RF + + STIGV+F +T++++G+TIK QIWDTAGQER+ ITS+YYRGA G L+VYDVT ++ NV +WL+E+ HA N+ +++GNK+DL + V A+ +A+ G+ F+ETSA A NVE+AF T+ +EI + + + S GE Sbjct: 5 YDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASGGE 182
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 9.945e-44 Identity = 81/186 (43.55%), Postives = 132/186 (70.97%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI-YRIISKKSLSSGEPAPSNIK 693 YD+LFK++LIGDSGVGK+ L+ RF + F STIG++F RT+++EG+ IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN+ W+K ++++A + + +++GNK D++ R V E A+ A + F ETSA ++NV++AF ++ +I + ++S +S +P+ +++K Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGNSSKPSSTDLK 190
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.945e-44 Identity = 86/202 (42.57%), Postives = 131/202 (64.85%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASKANTKK 744 YD+LFK++LIGDSGVGK+ L+ RF + F STIG++F RT+++EG+ IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN+ W+K ++++A + + +++GNK D++ R V E A A G+ F ETSA ++NV++AF ++ +I L SG N + + + + K NT K Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDIL-------LKSGGRRSGNHSKPSSTDLKPSDKKNTNK 199
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.945e-44 Identity = 89/205 (43.41%), Postives = 128/205 (62.44%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASKANTKKPCC 753 YD LFK++LIGDSGVGK+ +L RF+ + F STIG++F +T++++G+ IK QIWDTAGQER+ IT++YYRGA+G +LVYD+T +FEN+S+WL+ + +HA+ ++ M++GNK D+ R V + A G+ F ETSA IN+EKAF T+ +I R K EP N+ + G K CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK-----EPNSENVD-----ISSGGGVTGWKSKCC 200
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.945e-44 Identity = 89/205 (43.41%), Postives = 128/205 (62.44%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASKANTKKPCC 753 YD LFK++LIGDSGVGK+ +L RF+ + F STIG++F +T++++G+ IK QIWDTAGQER+ IT++YYRGA+G +LVYD+T +FEN+S+WL+ + +HA+ ++ M++GNK D+ R V + A G+ F ETSA IN+EKAF T+ +I R K EP N+ + G K CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK-----EPNSENVD-----ISSGGGVTGWKSKCC 200
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.945e-44 Identity = 89/205 (43.41%), Postives = 128/205 (62.44%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASKANTKKPCC 753 YD LFK++LIGDSGVGK+ +L RF+ + F STIG++F +T++++G+ IK QIWDTAGQER+ IT++YYRGA+G +LVYD+T +FEN+S+WL+ + +HA+ ++ M++GNK D+ R V + A G+ F ETSA IN+EKAF T+ +I R K EP N+ + G K CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK-----EPNSENVD-----ISSGGGVTGWKSKCC 200
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.299e-43 Identity = 94/207 (45.41%), Postives = 130/207 (62.80%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASKANTKKPCC 753 + YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G LL+YDVT +F+NV W + HA N+ ++IGNK D + R V+ E Q+ A+ G+ F+E SA +NV++AF T+ EI KK E SN + + +G T K CC Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI-----KKQKIDAENEFSN--QANNVDLG---NDRTVKRCC 200 The following BLAST results are available for this feature:
BLAST of FC929743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929743 ID=FC929743; Name=FC929743; organism=Citrus clementina; type=EST; length=824bpback to top |