FC929743

Overview
NameFC929743
Unique NameFC929743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length824
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAS1_YEAST (Ras-like protein 1 OS=Saccharomyces cerevisiae GN=RAS1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.018e-20
Identity = 56/159 (35.22%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIV-IMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTIL 624
            +K+V++G  GVGKS L  +F ++ F  E   TI   +  + + ++ +     I DTAGQE Y A+   Y R   G LLVY VT   +F+ +  + ++++   DS+ + ++++GNK DL++ R V+ ED    A++    F+ETSA +AINV++AF +++
Sbjct:   11 YKIVVVGGGGVGKSALTIQFIQSYFVDEYDPTIEDSYRKQVV-IDDKVSILDILDTAGQEEYSAMREQYMRTGEGFLLVYSVTSRNSFDELLSYYQQIQRVKDSDYIPVVVVGNKLDLENERQVSYEDGLRLAKQLNAPFLETSAKQAINVDEAFYSLI 168          
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RBL2A_PONAB (Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20
Identity = 53/153 (34.64%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  154 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF 612
            K++ +GDS VGKS L+ RF  + F  +  ST  +     T  V+G+TI    WDTAGQER++++ ++YY  A   ++V+DV +  T++N+S W  ELR+     I  +++ NK D        T+ + ++A++  L     SA +  NV K F
Sbjct:   23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYKNLSAWYTELREFR-PEIPCLVVANKIDAD---INVTQKSFNFAKKFSLPLYFVSAADGTNVVKLF 171          
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RASL_COPCI (24 kDa Ras-like protein OS=Coprinopsis cinerea GN=CC-RAS PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20
Identity = 59/177 (33.33%), Postives = 97/177 (54.80%), Query Frame = 1
Query:  151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKE-LRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPA 678
            +K+V++G  GVGKS L  +F ++ F  E   TI   +  + + ++       + DTAGQE Y A+   Y R   G LLVY +T   +FE +S + ++ LR     +  ++++ NK DL++ R V   + +  A+  G  FIETSA + INV++AF  ++ EI +    +   +G PA
Sbjct:   11 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCI-IDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISIFHQQILRVKDQDSFPVIVVANKCDLEYERQVGMNEGRDLAKHFGCKFIETSAKQRINVDEAFSNLVREIRKY--NREQQTGRPA 184          
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAS_CARAU (Ras-like protein (Fragment) OS=Carassius auratus PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.442e-20
Identity = 66/184 (35.87%), Postives = 101/184 (54.89%), Query Frame = 1
Query:  151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADS-NIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI--YRIISKKSLSSGEPAPSNIK 693
            +K+V++G  GVGKS L  +  +N F  E   TI   +  + + ++G T    I DTAGQE Y A+   Y R   G L V+ +    +FE++  + ++++   DS ++ ++++GNK DL   R+V T+ AQ  A   G+ FIETSA     VE AF T++ EI  YR+   + LS  E     IK
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPS-RSVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRL---RKLSKEEETTQCIK 182          
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RASN_XENLA (GTPase NRas OS=Xenopus laevis GN=nras PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.442e-20
Identity = 62/173 (35.84%), Postives = 97/173 (56.07%), Query Frame = 1
Query:  151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADS-NIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSS 666
            +K+V++G  GVGKS L  +  +N F  E   TI   +  + + ++G T    I DTAGQE Y A+   Y R   G L V+ +    +F +++ + ++++   DS ++ ++++GNK DL   R V T+ AQ  A   G+ FIETSA     VE AF T++ EI++   KK  SS
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINAYREQIKRVKDSDDVPMVLVGNKCDLPS-RTVDTKQAQELARSYGIPFIETSAKTRQGVEDAFYTLVREIHQYRMKKLDSS 174          
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: DJ27A_XENLA (DnaJ homolog subfamily C member 27-A OS=Xenopus laevis GN=dnajc27-A PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.442e-20
Identity = 52/178 (29.21%), Postives = 91/178 (51.12%), Query Frame = 1
Query:  115 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHAD-----SNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 633
            + +R D       KV+ +G++ VGKS ++ R+    F  + ++TIG+++    + ++ R IK  I+D AG   +  + + +Y+   G +LVYDV    TFE++  WL E++          NIV  +  NK D    R+V   + + ++E +G  + ETSA     + + FQ   S I
Sbjct:    5 LQKRKDSRKALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVHIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGHKETFESLDGWLAEMKQELGPQGNIDNIVFAVCANKIDSTKHRSVDESEGRLWSESKGFLYFETSAQSGEGINEMFQAFYSAI 182          
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RBL2A_HUMAN (Rab-like protein 2A OS=Homo sapiens GN=RABL2A PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.495e-20
Identity = 58/187 (31.02%), Postives = 97/187 (51.87%), Query Frame = 1
Query:  154 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF--------------QTILSEIYRIISKKSLSSGE 672
            K++ +GDS VGKS L+ RF  + F  +  ST  +     T  V+G+TI    WDTAGQER++++ ++YY  A   ++V+D+ +  T+ N+S W  ELR+     I  +++ NK D  ++    T+ + ++A++  L     SA +  NV K F              Q  + EI++ +   SL   E
Sbjct:   23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFR-PEIPCIVVANKIDDINV----TQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEE 204          
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RASG_DICDI (Ras-like protein rasG OS=Dictyostelium discoideum GN=rasG PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.871e-20
Identity = 57/162 (35.19%), Postives = 92/162 (56.79%), Query Frame = 1
Query:  151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKE-LRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 633
            +K+V++G  GVGKS L  +  +N F  E   TI   +  + + ++  T    I DTAGQE Y A+   Y R   G L VY +T  ++F+ ++ + ++ LR      + ++++GNK DL+  R V T + Q  A+  G  F+ETSA   +NVE+AF +++ EI
Sbjct:    4 YKLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYR-KQVTIDEETCLLDILDTAGQEEYSAMRDQYMRTGQGFLCVYSITSRSSFDEIASFREQILRVKDKDRVPMIVVGNKCDLESDRQVTTGEGQDLAKSFGSPFLETSAKIRVNVEEAFYSLVREI 164          
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAS2_YEAST (Ras-like protein 2 OS=Saccharomyces cerevisiae GN=RAS2 PE=1 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 5.871e-20
Identity = 55/158 (34.81%), Postives = 95/158 (60.13%), Query Frame = 1
Query:  151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIV-IMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTI 621
            +K+V++G  GVGKS L  + T++ F  E   TI   +  + + ++       I DTAGQE Y A+   Y R   G LLVY +T  ++ + +  + +++    D++ V I+++GNK+DL++ + V+ +D  + A++    F+ETSA +AINVE+AF T+
Sbjct:   11 YKLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIEDSYRKQVV-IDDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQMNAPFLETSAKQAINVEEAFYTL 167          
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.668e-20
Identity = 59/174 (33.91%), Postives = 96/174 (55.17%), Query Frame = 1
Query:  151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKE-LRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSG 669
            +K+V++G  GVGKS L  +F ++ F  E   TI   +  + + ++       + DTAGQE Y A+   Y R   G LLVY +T   +FE +S + ++ LR        ++++ NK DL++ R V   + +  A   G  F+ETSA   INV++AFQ ++ EI R  +K+  ++G
Sbjct:   11 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCV-IDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKDQDTFPVVVVANKCDLEYERQVGMNEGRDLARHFGCKFVETSAKVRINVDQAFQDLVREI-RKYNKEQQTTG 182          
The following BLAST results are available for this feature:
BLAST of FC929743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS1_YEAST2.018e-2035.22Ras-like protein 1 OS=Saccharomyces cerevisiae GN=... [more]
RBL2A_PONAB2.635e-2034.64Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2... [more]
RASL_COPCI2.635e-2033.3324 kDa Ras-like protein OS=Coprinopsis cinerea GN=... [more]
RAS_CARAU3.442e-2035.87Ras-like protein (Fragment) OS=Carassius auratus P... [more]
RASN_XENLA3.442e-2035.84GTPase NRas OS=Xenopus laevis GN=nras PE=2 SV=1[more]
DJ27A_XENLA3.442e-2029.21DnaJ homolog subfamily C member 27-A OS=Xenopus la... [more]
RBL2A_HUMAN4.495e-2031.02Rab-like protein 2A OS=Homo sapiens GN=RABL2A PE=2... [more]
RASG_DICDI5.871e-2035.19Ras-like protein rasG OS=Dictyostelium discoideum ... [more]
RAS2_YEAST5.871e-2034.81Ras-like protein 2 OS=Saccharomyces cerevisiae GN=... [more]
RAS_LENED7.668e-2033.91Ras-like protein OS=Lentinula edodes PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AB02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AB02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929743 ID=FC929743; Name=FC929743; organism=Citrus clementina; type=EST; length=824bp
ATCAAAATCACAGTTTCCGGTTCTACGCTTTAAATTCATCTTCACTTCTT
CAACTGAAGAAGCGGTCGTCTCTCATTTTTAATTTGTTATCTAAAGATAT
ATATATAATTATAAATGGCGAGGAGACCGGACGAGGAATACGATTACTTG
TTCAAAGTGGTATTAATCGGCGATTCGGGAGTCGGCAAGTCGAATTTACT
CTCCCGATTTACTCGTAACGAGTTCTGTTTGGAGTCCAAATCCACTATTG
GCGTCGAATTCGCTACACGCACTCTTCAAGTTGAAGGAAGGACAATAAAA
GCTCAGATATGGGACACTGCAGGTCAGGAGCGATACAGAGCAATAACCAG
TGCCTATTATAGAGGTGCACTCGGAGCTCTTTTAGTTTATGACGTGACGA
AACCAACAACATTTGAAAATGTGAGCCGATGGCTGAAGGAACTGAGGGAC
CACGCAGACTCCAACATTGTGATCATGATGATTGGCAATAAGACTGATCT
GAAACACCTCCGAGCTGTTGCCACAGAGGATGCCCAAAGCTATGCTGAGA
GAGAAGGGCTTTCCTTCATTGAAACCTCAGCTCTTGAAGCAATAAATGTC
GAGAAGGCTTTCCAGACAATTCTCTCAGAGATATACCGGATAATCAGCAA
GAAGTCCCTCTCTTCAGGGGAGCCAGCTCCTTCAAACATCAAAGAAGGAC
AGACTATCGTAGTAGGAGGGGCATCAAAGGCCAACACAAAGAAACCTTGT
TGCTCTTCATCCTAAAGATGGGTCTGTCTTCTTTGGTTATCTCAATTTCC
TCCCTTTTTGTCGTGGCGGGCTTC
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