FC929743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: DJC27_RAT (DnaJ homolog subfamily C member 27 OS=Rattus norvegicus GN=Dnajc27 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.231e-19 Identity = 50/165 (30.30%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 154 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHAD-----SNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 633 KV+ +G++ VGKS ++ R+ F + +TIG+++ +QV R IK I+D AG + + + +Y+ G +LVYDV + +F+ + WL E++ NIV ++ NK D R + + + +AE G + ETSA + + FQT I Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFFEVRNEFYKDTQGVILVYDVGQKDSFDALDSWLAEMKQELGPHGNMENIVFVVCANKIDCSKHRCIDESEGRLWAESRGFLYFETSAQTGEGINEMFQTFYMSI 182
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RASN_RAT (GTPase NRas OS=Rattus norvegicus GN=Nras PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 61/173 (35.26%), Postives = 96/173 (55.49%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADS-NIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSS 666 +K+V++G GVGKS L + +N F E TI + + + ++G T I DTAGQE Y A+ Y R G L V+ + +F +++ + ++++ DS ++ ++++GNK DL R V T+ A A+ G+ FIETSA VE AF T++ EI + KK SS Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSS 174
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RASN_MOUSE (GTPase NRas OS=Mus musculus GN=Nras PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 61/175 (34.86%), Postives = 97/175 (55.43%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADS-NIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE 672 +K+V++G GVGKS L + +N F E TI + + + ++G T I DTAGQE Y A+ Y R G L V+ + +F +++ + ++++ DS ++ ++++GNK DL R V T+ A A+ G+ FIETSA VE AF T++ EI + KK SS + Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRLKKLNSSDD 176
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAN_XENTR (GTP-binding nuclear protein Ran OS=Xenopus tropicalis GN=ran PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF 612 FK+VL+GD G GK+ + R EF + +T+GVE IK +WDTAGQE++ + YY A A++++DVT T++NV W ++L NI I++ GNK D+K + A + ++ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAN_XENLA (GTP-binding nuclear protein Ran OS=Xenopus laevis GN=ran PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF 612 FK+VL+GD G GK+ + R EF + +T+GVE IK +WDTAGQE++ + YY A A++++DVT T++NV W ++L NI I++ GNK D+K + A + ++ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAN_RAT (GTP-binding nuclear protein Ran OS=Rattus norvegicus GN=Ran PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF 612 FK+VL+GD G GK+ + R EF + +T+GVE IK +WDTAGQE++ + YY A A++++DVT T++NV W ++L NI I++ GNK D+K + A + ++ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAN_PONAB (GTP-binding nuclear protein Ran OS=Pongo abelii GN=RAN PE=2 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF 612 FK+VL+GD G GK+ + R EF + +T+GVE IK +WDTAGQE++ + YY A A++++DVT T++NV W ++L NI I++ GNK D+K + A + ++ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAN_MOUSE (GTP-binding nuclear protein Ran OS=Mus musculus GN=Ran PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF 612 FK+VL+GD G GK+ + R EF + +T+GVE IK +WDTAGQE++ + YY A A++++DVT T++NV W ++L NI I++ GNK D+K + A + ++ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAN_MACFA (GTP-binding nuclear protein Ran OS=Macaca fascicularis GN=RAN PE=2 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF 612 FK+VL+GD G GK+ + R EF + +T+GVE IK +WDTAGQE++ + YY A A++++DVT T++NV W ++L NI I++ GNK D+K + A + ++ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAN_HUMAN (GTP-binding nuclear protein Ran OS=Homo sapiens GN=RAN PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF 612 FK+VL+GD G GK+ + R EF + +T+GVE IK +WDTAGQE++ + YY A A++++DVT T++NV W ++L NI I++ GNK D+K + A + ++ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPF 161 The following BLAST results are available for this feature:
BLAST of FC929743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929743 ID=FC929743; Name=FC929743; organism=Citrus clementina; type=EST; length=824bpback to top |