FC929743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.135e-46 Identity = 90/179 (50.28%), Postives = 128/179 (71.51%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE 672 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+TIK QIWDTAGQER+R +TS+YYRGA G ++VYDVT ++ NV +WL+E+ +A N+ +++GNK+DL + V A+ +A+ G+ F+ETSA A NVE+AF T+ +EI + + + S GE Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 8.135e-46 Identity = 98/202 (48.51%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASKANTK 741 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE++F T+ +EI KK + G A GGA K+N K Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATA------------GGAEKSNVK 191
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.063e-45 Identity = 98/208 (47.12%), Postives = 136/208 (65.38%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIV--VGGASKANTKKPCC 753 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+ IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ +A N+ +++GNK+DL + V + A+++A+ G+ F+ETSA A NVE+AF T+ +EI K+ + +P P K G +V G N CC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI------KNRMASQPVPP--KPGGPVVRPTEGKPINNKSSSCC 203
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 1.063e-45 Identity = 92/208 (44.23%), Postives = 141/208 (67.79%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASKANTKKPCC 753 + EYDYLFK++LIG+SGVGKS LL RF+ + + + STIGV+F +T++++G+T+K QIWDTAGQER+R ITS+YYRG+ G ++VYDVT +F V WL+E+ +A S ++ +++GNK DLK R V + A+ +A+ + F+ETSAL++ NVE AF T+ +I +S+++L+ ++ + + G S NT CC Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNE---TTQKKEDKGNVNLKGQSLTNTGGGCC 206
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.063e-45 Identity = 90/171 (52.63%), Postives = 122/171 (71.35%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISK 651 Y YLFK ++IGD+GVGKS LL +FT F T+GVEF R + ++G+ IK QIWDTAGQE +R+IT +YYRGA GALLVYD+T+ TF +++ WL++ R H++SN+VIM+IGNK+DL+ R V E+ +++A GL F+ETSA A NVE+AF EIY I + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.063e-45 Identity = 96/196 (48.98%), Postives = 133/196 (67.86%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSG-EPAPSNIKEGQTIVVGG 720 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE+AF T+ +EI + + + S G E + NI+ GG Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKSNVNIQSTPVKSSGG 199
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 183.341 bits (464), Expect = 1.388e-45 Identity = 94/194 (48.45%), Postives = 128/194 (65.98%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGG 720 Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+VYD+T+ +T+ ++S WL + R+ + N VI++IGNK DL+ R V E+A+ +AE GL F+E SA NVE AF +IY+ I SL A S ++ + GG Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDL-NAAESGVQHKPSAPQGG 200
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 183.341 bits (464), Expect = 1.388e-45 Identity = 94/194 (48.45%), Postives = 128/194 (65.98%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGG 720 Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+VYD+T+ +T+ ++S WL + R+ + N VI++IGNK DL+ R V E+A+ +AE GL F+E SA NVE AF +IY+ I SL A S ++ + GG Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDL-NAAESGVQHKPSAPQGG 200
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3) HSP 1 Score: 183.341 bits (464), Expect = 1.388e-45 Identity = 94/194 (48.45%), Postives = 128/194 (65.98%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGG 720 Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+VYD+T+ +T+ ++S WL + R+ + N VI++IGNK DL+ R V E+A+ +AE GL F+E SA NVE AF +IY+ I SL A S ++ + GG Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDL-NAAESGVQHKPSAPQGG 200
BLAST of FC929743 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3) HSP 1 Score: 183.341 bits (464), Expect = 1.388e-45 Identity = 94/194 (48.45%), Postives = 128/194 (65.98%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGG 720 Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+VYD+T+ +T+ ++S WL + R+ + N VI++IGNK DL+ R V E+A+ +AE GL F+E SA NVE AF +IY+ I SL A S ++ + GG Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDL-NAAESGVQHKPSAPQGG 200 The following BLAST results are available for this feature:
BLAST of FC929743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929743 ID=FC929743; Name=FC929743; organism=Citrus clementina; type=EST; length=824bpback to top |