FC929754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD_BOVIN (Acyl-CoA desaturase OS=Bos taurus GN=SCD PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14 Identity = 46/139 (33.09%), Postives = 68/139 (48.92%), Query Frame = 2 Query: 338 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 +HL AL+ P C ++ + V F Y + G LGIT HR SHR++K L + Q + +W HR HH+F +++ DPH+ GF+FSH+ WL K ++ G N+ DL + F R Y Sbjct: 82 LHLGALYGITLIPTCKIYTYIWVLF--YYLMGALGITAGAHRLWSHRTYKARLPLRVFLIIGNTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLNLSDLRAEKLVMFQRRYY 218
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD1_MOUSE (Acyl-CoA desaturase 1 OS=Mus musculus GN=Scd1 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14 Identity = 46/144 (31.94%), Postives = 72/144 (50.00%), Query Frame = 2 Query: 326 VVLAMHLLALFA----PFCFTWSSLRVAFGL-YVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 +++ +HL L+ P C ++ L FG+ Y +T LGIT HR SHR++K L + Q + +W HR HH+F ++ DPH+ GF+FSH+ WL K ++ GG ++ DL+ + F R Y Sbjct: 74 LMVLLHLGGLYGIILVPSCKLYTCL---FGIFYYMTSALGITAGAHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYY 214
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD_SHEEP (Acyl-CoA desaturase OS=Ovis aries GN=SCD PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.338e-14 Identity = 46/139 (33.09%), Postives = 66/139 (47.48%), Query Frame = 2 Query: 338 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 +HL AL+ P C ++ L V F Y V LGIT HR SHR++K L + Q + +W HR HH+F +++ DPH+ GF+FSH+ WL K + G ++ DL + F R Y Sbjct: 82 LHLGALYGITLIPTCKIYTFLWVLF--YYVISALGITAGVHRLWSHRTYKARLPLRVFLIIANTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSHVGWLLVRKHPAVREKGATLDLSDLRAEKLVMFQRRYY 218
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD2_MOUSE (Acyl-CoA desaturase 2 OS=Mus musculus GN=Scd2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.338e-14 Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 2 Query: 338 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 +HL AL+ P C ++ L LY V LGIT HR SHR++K L + Q + +W HR HH+F ++ DPH+ GF+FSH+ WL K ++ GG ++ DL+ + F R Y Sbjct: 81 LHLGALYGITLVPSCKLYTCLFAY--LYYVISALGITAGAHRLWSHRTYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYY 217
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD2_RAT (Acyl-CoA desaturase 2 OS=Rattus norvegicus GN=Scd2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.360e-14 Identity = 45/139 (32.37%), Postives = 67/139 (48.20%), Query Frame = 2 Query: 338 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 +H+ AL+ P C ++ L LY V LGIT HR SHR++K L + Q + +W HR HH+F ++ DPH+ GF+FSH+ WL K ++ GG ++ DL+ + F R Y Sbjct: 81 LHIGALYGITLVPSCKVYTCLFAY--LYYVISALGITAGAHRLWSHRTYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYY 217
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: SCD5_BOVIN (Stearoyl-CoA desaturase 5 OS=Bos taurus GN=SCD5 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14 Identity = 47/137 (34.31%), Postives = 67/137 (48.91%), Query Frame = 2 Query: 335 AMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKD--SVLERCGGPNNVGDLEKQPFYRFLRSTY 739 A L L+A FCF ++L G+T HR SHRS+K L A + Q + +W HR HH++ +++ DPH+ GF+FSH+ WLF + V+E+ G +V DL P RF R Y Sbjct: 75 AQPLTLLWAYFCFLLTAL-------------GVTAGAHRLWSHRSYKAKLPLRIFLAAANSMAFQNDIFEWSRDHRVHHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEK-GRKLDVTDLLADPVVRFQRKYY 197
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD_PIG (Acyl-CoA desaturase (Fragment) OS=Sus scrofa GN=SCD PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14 Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 2 Query: 338 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 +HL AL+ P C ++ L AF Y+++ + G+T HR SHR++K L + Q + +W HR HH+F +++ DPH+ GF+FSH+ WL K ++ GG N+ DL+ + F R Y Sbjct: 71 LHLGALYGIILIPTCKIYTLLW-AFAYYLLSAV-GVTAGAHRLWSHRTYKARLPLRVFLIIANTMAFQNDVYEWARDHRAHHKFSETDADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGLLNMSDLKAEKLVMFQRRYY 207
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD_CAPHI (Acyl-CoA desaturase OS=Capra hircus GN=SCD PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 45/139 (32.37%), Postives = 66/139 (47.48%), Query Frame = 2 Query: 338 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 +HL AL+ P C ++ L V F Y + LGIT HR SHR++K L + Q + +W HR HH+F +++ DPH+ GF+FSH+ WL K + G ++ DL + F R Y Sbjct: 82 LHLGALYGITLIPTCKIYTFLWVLF--YYMMSALGITAGVHRLWSHRTYKARLPLRVFLIIANTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSHVGWLLVRKHPAVREKGATLDLSDLRAEKLVMFQRRYY 218
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACO11_TRINI (Acyl-CoA Delta(11) desaturase OS=Trichoplusia ni GN=D11DS PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 9.712e-14 Identity = 43/133 (32.33%), Postives = 70/133 (52.63%), Query Frame = 2 Query: 341 HLLALFAPF-CFT---WSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRF 724 HL AL+ + CFT W +L +F L+ ++ + GIT HR +H++FK LE + + Q I W HR HH++ D++ DPH+ GF++SH+ WL K + + G ++ D+ P +F Sbjct: 48 HLAALYGLYLCFTSAKWETLLFSFVLFHMSNI-GITAGAHRLWTHKTFKAKLPLEIVLMIFNSLAFQNTAITWAREHRLHHKYSDTDADPHNASRGFFYSHVGWLLVKKHPDVLKYGKTIDMSDVYNNPVLKF 179
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD_HUMAN (Acyl-CoA desaturase OS=Homo sapiens GN=SCD PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.268e-13 Identity = 46/139 (33.09%), Postives = 65/139 (46.76%), Query Frame = 2 Query: 338 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 +HL AL+ P C ++ L F Y LGIT HR SHRS+K L + Q + +W HR HH+F ++ DPH+ GF+FSH+ WL K ++ G ++ DLE + F R Y Sbjct: 82 LHLGALYGITLIPTCKFYTWLWGVF--YYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKLVMFQRRYY 218 The following BLAST results are available for this feature:
BLAST of FC929754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929754 ID=FC929754; Name=FC929754; organism=Citrus clementina; type=EST; length=780bpback to top |