FC929754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: SCD5_HUMAN (Stearoyl-CoA desaturase 5 OS=Homo sapiens GN=SCD5 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.820e-13 Identity = 46/152 (30.26%), Postives = 73/152 (48.03%), Query Frame = 2 Query: 290 RNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKD--SVLERCGGPNNVGDLEKQPFYRFLRSTY 739 RN + + G V ++ L+ P W A+ +++ L G+T HR SHRS++ L A + Q + +W HR HH++ +++ DPH+ GF+FSH+ WLF + V+E+ G +V DL P R R Y Sbjct: 48 RNVVLMSLLHLGAVYSLVLIPKAKPLTLLW-----AYFCFLLAAL-GVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQNDIFEWSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEK-GRKLDVTDLLADPVVRIQRKYY 192
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD1_RAT (Acyl-CoA desaturase 1 OS=Rattus norvegicus GN=Scd1 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.295e-13 Identity = 37/112 (33.04%), Postives = 55/112 (49.11%), Query Frame = 2 Query: 407 YVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 Y + LGIT HR SHR++K L + Q + +W HR HH+F ++ DPH+ GF+FSH+ WL K ++ GG ++ DL+ + F R Y Sbjct: 106 YYLISALGITAGAHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYY 217
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD_CYPCA (Acyl-CoA desaturase OS=Cyprinus carpio PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 8.222e-13 Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = 2 Query: 338 MHLLALFAPFCF------TWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDK--DSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 +HL AL+ F F TW + F ++ LGIT HR SHRS+K L+ A + Q + +W HR HH++ +++ DPH+ + GF+FSH+ WL + V+E+ G + DL+ F R Y Sbjct: 49 LHLGALYGLFLFPSARALTW----IWFFGCLLFSALGITAGAHRLWSHRSYKASLPLQIFLALGNSMAFQNDIYEWSRDHRVHHKYSETDADPHNAVRGFFFSHVGWLLVRKHPDVIEK-GRKLELSDLKADKVVMFQRRFY 185
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACOD_MESAU (Acyl-CoA desaturase OS=Mesocricetus auratus GN=SCD PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.960e-12 Identity = 36/113 (31.86%), Postives = 54/113 (47.79%), Query Frame = 2 Query: 404 LYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTY 739 +Y V + GI HR SHR++K L + Q + +W HR HH+F ++ DPH GF+FSH+ WL K ++ GG ++ DL+ + F R Y Sbjct: 101 VYYVISIEGIGAGVHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETYADPHDSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYY 213
BLAST of FC929754 vs. ExPASy Swiss-Prot
Match: ACO1_YEAST (Acyl-CoA desaturase 1 OS=Saccharomyces cerevisiae GN=OLE1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.091e-12 Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 2 Query: 407 YVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYIL 745 Y G + IT +HR SHRS+ L +A G S++G+ W +HR HH++ D+ RDP+ G W+SHM W+ K + + ++ D+ RF YIL Sbjct: 148 YYAVGGVSITAGYHRLWSHRSYSAHWPLRLFYAIFGCASVEGSAKWWGHSHRIHHRYTDTLRDPYDARRGLWYSHMGWMLLKPNPKYKARA--DITDMTDDWTIRFQHRHYIL 258 The following BLAST results are available for this feature:
BLAST of FC929754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929754 ID=FC929754; Name=FC929754; organism=Citrus clementina; type=EST; length=780bpback to top |