FC929755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 175.637 bits (444), Expect = 6.788e-44 Identity = 84/121 (69.42%), Postives = 106/121 (87.60%), Query Frame = 1 Query: 1 AQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLS 363 AQIW+TA QE+Y AIT+AYYRGA GALL+YD+ K T+ENV RWLKELRDHADS IVIM++GNK+DL+HLRAV T++A ++AE+ GLSF+E SAL++ NVE AFQTIL+EIYRI+S+K +S Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 6.788e-44 Identity = 84/121 (69.42%), Postives = 106/121 (87.60%), Query Frame = 1 Query: 1 AQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLS 363 AQIW+TA QE+Y AIT+AYYRGA GALL+YD+ K T+ENV RWLKELRDHADS IVIM++GNK+DL+HLRAV T++A ++AE+ GLSF+E SAL++ NVE AFQTIL+EIYRI+S+K +S Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 175.637 bits (444), Expect = 6.788e-44 Identity = 84/121 (69.42%), Postives = 106/121 (87.60%), Query Frame = 1 Query: 1 AQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLS 363 AQIW+TA QE+Y AIT+AYYRGA GALL+YD+ K T+ENV RWLKELRDHADS IVIM++GNK+DL+HLRAV T++A ++AE+ GLSF+E SAL++ NVE AFQTIL+EIYRI+S+K +S Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 1.512e-43 Identity = 84/121 (69.42%), Postives = 105/121 (86.78%), Query Frame = 1 Query: 1 AQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLS 363 AQIW+TA QE+Y AIT+AYYRGA GALL+YD+ K T+ENV RWLKELRDHADS IVIM++GNK+DL+HLRAV T++A ++AE+ GLSF+E SAL+ NVE AFQTIL+EIYRI+S+K +S Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMS 182
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.746e-43 Identity = 85/126 (67.46%), Postives = 107/126 (84.92%), Query Frame = 1 Query: 1 AQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLSSWEPA 378 AQIW+TA QE+Y AIT+AYYRGA GALL YD+TK TF+NV RWL+ELRDH DS IVI++ GNK+DLKHLRAV+ +D + ++EGLSF+E SALEA+NV+KAFQTIL++IY IISKK+L++ E A Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQEAA 188
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.725e-42 Identity = 80/122 (65.57%), Postives = 106/122 (86.89%), Query Frame = 1 Query: 1 AQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLSS 366 AQIW+TA QE+Y AIT+AYYRGA GAL++YD+TK ++F+NV RWLKELR+HADS IVIM++GNKTDL HLRAV+TE+A ++A LSF+E SA++A NVE+AFQT+L+EI+RI+S +SL + Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEA 182
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 4.865e-42 Identity = 81/126 (64.29%), Postives = 109/126 (86.51%), Query Frame = 1 Query: 1 AQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLSSWEPA 378 AQIW+TA QE+Y AIT+AYYRGA GALL+YD+TK +F+NV RWL+ELRDHADS IVIMM+GNK+DL HLRAV+ ++ + AE+EGL F+E SA+EA+NVE+AFQTI++E+Y I+++K+L++ E A Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAA 188
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 169.474 bits (428), Expect = 4.865e-42 Identity = 80/121 (66.12%), Postives = 105/121 (86.78%), Query Frame = 1 Query: 1 AQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLS 363 AQIW+TA QE+Y AIT+AYYRGA GALL+YD+ K T+ENV RWLKELRDHADS IVIM++GNK+DL+HLRAV T++A ++AE+ LSF+E SAL++ NVE+AF+ IL+EIYRI+S+K ++ Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA 182
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 4.865e-42 Identity = 80/121 (66.12%), Postives = 105/121 (86.78%), Query Frame = 1 Query: 1 AQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLS 363 AQIW+TA QE+Y AIT+AYYRGA GALL+YD+ K T+ENV RWLKELRDHADS IVIM++GNK+DL+HLRAV T++A ++AE+ LSF+E SAL++ NVE+AF+ IL+EIYRI+S+K ++ Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA 182
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 169.474 bits (428), Expect = 4.865e-42 Identity = 80/121 (66.12%), Postives = 105/121 (86.78%), Query Frame = 1 Query: 1 AQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLS 363 AQIW+TA QE+Y AIT+AYYRGA GALL+YD+ K T+ENV RWLKELRDHADS IVIM++GNK+DL+HLRAV T++A ++AE+ LSF+E SAL++ NVE+AF+ IL+EIYRI+S+K ++ Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA 182 The following BLAST results are available for this feature:
BLAST of FC929755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929755 ID=FC929755; Name=FC929755; organism=Citrus clementina; type=EST; length=380bpback to top |