FC929755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RAB18_CAEBR (Ras-related protein Rab-18 OS=Caenorhabditis briggsae GN=rab-18 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.334e-15 Identity = 40/110 (36.36%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 7 IWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDH-ADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEI 333 IW+TA QE++ +T +YYRGA+G + +YDVT ++FE + W+ E+ + + ++ MM+ NK D+ + R V E+ L +A+R F+EASA V+ F+ ++ +I Sbjct: 64 IWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKHWMTEVDTYCTNDNVIKMMVANKIDMPN-RTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKI 172
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RB40A_HUMAN (Ras-related protein Rab-40A OS=Homo sapiens GN=RAB40A PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.742e-15 Identity = 41/122 (33.61%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 4 QIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLSSW 369 ++W+T+ Q ++ I +Y RGA+G +L+YD+ +FE + RW+K++ +HA + +++GN+ L R V E A +YAER G++F E S L N+ ++F +E+ RI+ + +W Sbjct: 66 KLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHAPG-VPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESF----TELARIVLLRHRMNW 182
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RAB7A_DICDI (Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.742e-15 Identity = 47/111 (42.34%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 4 QIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHA----DSYIVIMMIGNKTDLKHLRAVATEDALSYAEREG-LSFVEASALEAINVEKAFQTI 321 QIW+TA QE++ ++ A+YRGA +L YDV TFEN+ W E A +++GNK DL++ R V+ + A S+ + +G + + E SA EAINVE+AFQTI Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLENQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTI 170
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RAB6A_CHICK (Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 1.742e-15 Identity = 35/110 (31.82%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 4 QIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEI 333 Q+W+TA QE++ ++ +Y R + A+++YD+T +F+ ++W+ ++R S ++IM++GNKTDL R V+ E+ A+ + F+E SA NV++ F+ + + + Sbjct: 65 QLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RB40L_HUMAN (Ras-related protein Rab-40A-like OS=Homo sapiens GN=RAB40AL PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.275e-15 Identity = 41/122 (33.61%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 4 QIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEIYRIISKKSLSSW 369 ++W+T+ Q ++ I +Y RGA+G +L+YD+ +FE + RW+K++ +HA + +++GN+ L R V E A +YAER G++F E S L N+ ++F +E+ RI+ + +W Sbjct: 66 KLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHAPG-VPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESF----TELARIVLLRHRLNW 182
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RASEF_DANRE (RAS and EF-hand domain-containing protein OS=Danio rerio GN=rasef PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.972e-15 Identity = 44/114 (38.60%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 4 QIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLS----FVEASALEAINVEKAFQTILSEI 333 QIW+TA QE++ +I +Y+R A G LLLYDVT ++F NV W++++R+ D I + +IGNK DL+ R + + + E+ ++ F EASA E NV +A + E+ Sbjct: 519 QIWDTAGQERFRSIARSYFRKAHGVLLLYDVTSESSFLNVREWVEQIRESTDEDIPMCIIGNKVDLRAARPEGSCVSSIHGEKLAMNYNALFCEASAKEGTNVIEAVLHLAREV 632
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RAB6A_PONAB (Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.881e-15 Identity = 35/110 (31.82%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 4 QIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEI 333 Q+W+TA QE++ ++ +Y R + A+++YD+T +F+ ++W+ ++R S ++IM++GNKTDL R V+ E+ A+ + F+E SA NV++ F+ + + + Sbjct: 65 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RAB6A_MOUSE (Ras-related protein Rab-6A OS=Mus musculus GN=Rab6a PE=1 SV=4) HSP 1 Score: 80.1073 bits (196), Expect = 3.881e-15 Identity = 35/110 (31.82%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 4 QIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEI 333 Q+W+TA QE++ ++ +Y R + A+++YD+T +F+ ++W+ ++R S ++IM++GNKTDL R V+ E+ A+ + F+E SA NV++ F+ + + + Sbjct: 65 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RAB6A_HUMAN (Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.881e-15 Identity = 35/110 (31.82%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 4 QIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEI 333 Q+W+TA QE++ ++ +Y R + A+++YD+T +F+ ++W+ ++R S ++IM++GNKTDL R V+ E+ A+ + F+E SA NV++ F+ + + + Sbjct: 65 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
BLAST of FC929755 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.069e-15 Identity = 37/111 (33.33%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 4 QIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKEL-RDHADSYIVIMMIGNKTDLKHLRAVATEDALSYAEREGLSFVEASALEAINVEKAFQTILSEI 333 Q+W+TA QE++ ++ +Y R + A+++YDV+ TF N S+W++++ R+ S ++I+++GNKTDL R V+ + + G+ F+E SA E N++ F+ I + + Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAAL 171 The following BLAST results are available for this feature:
BLAST of FC929755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929755 ID=FC929755; Name=FC929755; organism=Citrus clementina; type=EST; length=380bpback to top |