FC929757

Overview
NameFC929757
Unique NameFC929757
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length792
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929757 vs. ExPASy Swiss-Prot
Match: PPI1_STAA8 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00891 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 54/153 (35.29%), Postives = 68/153 (44.44%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGSVVEG 773
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFG +++G
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDG 166          
BLAST of FC929757 vs. ExPASy Swiss-Prot
Match: PPI1_STAA3 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0857 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 54/153 (35.29%), Postives = 68/153 (44.44%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGSVVEG 773
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFG +++G
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDG 166          
BLAST of FC929757 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14
Identity = 50/128 (39.06%), Postives = 63/128 (49.22%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGSVVEGMD 779
            G I +E+F D TPR AENF   C              Y    +HR I  FM Q            +SI+G  FADE     K    GI++ ANAGP TN SQFF+  AK   LDGK+ + G V++G +
Sbjct:   10 GDIKVEVFCDATPRAAENFLGHCAAGT----------YNDVKWHRNIKSFMIQTGDPTGTGKGG-QSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVIDGAE 126          
BLAST of FC929757 vs. ExPASy Swiss-Prot
Match: PPIA_MYCLE (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium leprae GN=ppiA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.852e-14
Identity = 52/130 (40.00%), Postives = 66/130 (50.77%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGK---SGKPL--HYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGSVVE 770
            G I + LF +  P+T  NF  L  G K       SG P    Y G+ FHRVI GFM Q                G  FADE   + +   P +L+MANAGPGTNGSQFF+   +T  L+ +H +FG V +
Sbjct:   24 GDIKVALFGNHVPKTVANFVGLAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIFGEVTD 149          
BLAST of FC929757 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14
Identity = 59/155 (38.06%), Postives = 72/155 (46.45%), Query Frame = 3
Query:  318 VFFSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE---NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGSVVEG 773
            V FS I     P+ K +  ++      G + +EL     P+T  NF  LC       K GK   Y  + FHR IPGFM Q             SI+ S F DE       KH   G+LSMAN G  TN SQFF+       LDGKH VFG +V+G
Sbjct:  280 VMFSHIKSR--PSSKAYVRLSTN---FGALNLELHCGKAPKTCFNFLQLC-------KHGK---YDDTLFHRNIPGFMIQGGDPTGTGRGG-SSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDG 418          
BLAST of FC929757 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 51/143 (35.66%), Postives = 69/143 (48.25%), Query Frame = 3
Query:  339 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGSV 764
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC929757 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 52/133 (39.10%), Postives = 65/133 (48.87%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK--KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGSVVEGMDVVKA 791
            G I +EL  D  P    NF  L           K  +Y+ + FHR I  FM Q            +SI+G  F DE F    KH   GI+SMAN G  TNGSQFF+     + LD KH +FG VV G++V+ A
Sbjct:  285 GEINIELHTDYAPHAVYNFVQLA----------KQGYYRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDE-FCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDA 405          
BLAST of FC929757 vs. ExPASy Swiss-Prot
Match: CYPR_YEAST (Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccharomyces cerevisiae GN=CPR4 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 49/145 (33.79%), Postives = 67/145 (46.21%), Query Frame = 3
Query:  366 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGI--GKSGKPLH---YKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK--TEWLDGKHVVFGSVVEGMD 779
            +FD          +  EL+  V P+T  NF  L  G K +  GK    +H   Y+ +  ++V P    Q             ++YG  F DENF  KH  P  L+MA  GP +N S+F + T     E LDGK VVFG +  G+D
Sbjct:   55 YFDPVSKSMKEADLTFELYGTVVPKTVNNFAMLAHGVKAVIEGKDPNDIHTYSYRKTKINKVYPNKYIQGGVVAPDVGPF--TVYGPKFDDENFYLKHDRPERLAMAYFGPDSNTSEFIITTKADGNEELDGKSVVFGQITSGLD 197          
BLAST of FC929757 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13
Identity = 50/143 (34.97%), Postives = 69/143 (48.25%), Query Frame = 3
Query:  339 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGSV 764
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ES+YG+ F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC929757 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 51/143 (35.66%), Postives = 68/143 (47.55%), Query Frame = 3
Query:  339 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGSV 764
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG  F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
The following BLAST results are available for this feature:
BLAST of FC929757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPI1_STAA83.431e-1435.29Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA33.431e-1435.29Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL3_USTMA4.481e-1439.06Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]
PPIA_MYCLE5.852e-1440.00Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIL2_USTMA7.643e-1438.06Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
SDC10_MOUSE9.982e-1435.66Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
PPIL2_SCHPO9.982e-1439.10Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
CYPR_YEAST9.982e-1433.79Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccha... [more]
SDC10_RAT1.304e-1334.97Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]
SDC10_BOVIN2.224e-1335.66Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BF05RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929757 ID=FC929757; Name=FC929757; organism=Citrus clementina; type=EST; length=792bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGGTCAGTCGTCGAAGGAATGGACGTCGTCAAGGCCA
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