FC929768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929768 vs. ExPASy Swiss-Prot
Match: NDHK1_CYAP4 (NAD(P)H-quinone oxidoreductase subunit K 1 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndhK1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.347e-33 Identity = 62/140 (44.29%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 319 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKM 735 +++ L+DV ++ R S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++ AGT+T KMAPAL K+Y+QMP+P++VI+MG+C D+++PVDIY+PGCPP EA++ I++L+KK+ Sbjct: 29 ILTSLNDVYSWCRLSSLWPLMYGTACCFIEFAAMIGSRFDFDRFGLVPRCSPRQADLLITAGTITMKMAPALVKLYEQMPEPKYVIAMGACTITGGMFSTDSPTAVRGVDKLIPVDIYLPGCPPRPEAIMDAIVKLRKKI 168
BLAST of FC929768 vs. ExPASy Swiss-Prot
Match: NUOB_PSEPW (NADH-quinone oxidoreductase subunit B OS=Pseudomonas putida (strain W619) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 322 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYW 762 + KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R W Sbjct: 40 MGKLEDVLRGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGQERRPLSW 190
BLAST of FC929768 vs. ExPASy Swiss-Prot
Match: NUOB_PSEPK (NADH-quinone oxidoreductase subunit B OS=Pseudomonas putida (strain KT2440) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 322 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYW 762 + KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R W Sbjct: 40 MGKLEDVLRGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFVKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGQERRPLSW 190
BLAST of FC929768 vs. ExPASy Swiss-Prot
Match: NUOB_PSEPG (NADH-quinone oxidoreductase subunit B OS=Pseudomonas putida (strain GB-1) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 322 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYW 762 + KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R W Sbjct: 40 MGKLEDVLRGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFVKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGQERRPLSW 190
BLAST of FC929768 vs. ExPASy Swiss-Prot
Match: NUOB_PSEPF (NADH-quinone oxidoreductase subunit B OS=Pseudomonas fluorescens (strain Pf0-1) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 322 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYW 762 + KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R W Sbjct: 39 MGKLEDVLSGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGQERRPLSW 189
BLAST of FC929768 vs. ExPASy Swiss-Prot
Match: NUOB_PSEP1 (NADH-quinone oxidoreductase subunit B OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 322 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYW 762 + KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R W Sbjct: 40 MGKLEDVLRGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFVKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGQERRPLSW 190
BLAST of FC929768 vs. ExPASy Swiss-Prot
Match: NUOB_PSEF5 (NADH-quinone oxidoreductase subunit B OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 322 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYW 762 + KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R W Sbjct: 39 MGKLEDVLSGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGQERRPLSW 189
BLAST of FC929768 vs. ExPASy Swiss-Prot
Match: NUOB_PSEE4 (NADH-quinone oxidoreductase subunit B OS=Pseudomonas entomophila (strain L48) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 322 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYW 762 + KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+YVPGCPP EA L G++ LQ+ + + R W Sbjct: 40 MGKLEDVLRGAVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFVKMAPIIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESIGQERRPLSW 190
BLAST of FC929768 vs. ExPASy Swiss-Prot
Match: NUOB_PSEAE (NADH-quinone oxidoreductase subunit B OS=Pseudomonas aeruginosa GN=nuoB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 70/152 (46.05%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 322 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYW 762 + KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+Y+PGCPP EA L G++ LQ+ + + R W Sbjct: 40 MGKLEDVLNSTVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPVIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAFLQGLMLLQESIGQERRPLSW 190
BLAST of FC929768 vs. ExPASy Swiss-Prot
Match: NUOB_PSEAB (NADH-quinone oxidoreductase subunit B OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=nuoB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 70/152 (46.05%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 322 ISKLDDV----VNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYW 762 + KL+DV VN+ R+ S+WP +FGL+CC VEM A +D+ RFG + R SPRQ+D MV+AGT KMAP ++++Y+QM +P+WVISMGSCAN D+ +PVD+Y+PGCPP EA L G++ LQ+ + + R W Sbjct: 40 MGKLEDVLNSTVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPVIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAFLQGLMLLQESIGQERRPLSW 190 The following BLAST results are available for this feature:
BLAST of FC929768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929768 ID=FC929768; Name=FC929768; organism=Citrus clementina; type=EST; length=764bpback to top |