FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 300.827 bits (769), Expect = 5.476e-81 Identity = 153/213 (71.83%), Postives = 181/213 (84.98%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+G+TIKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL++ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC + Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCCQN 215
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 300.827 bits (769), Expect = 5.476e-81 Identity = 153/213 (71.83%), Postives = 181/213 (84.98%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+G+TIKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL++ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC + Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCCQN 215
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 300.827 bits (769), Expect = 5.476e-81 Identity = 153/213 (71.83%), Postives = 181/213 (84.98%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+G+TIKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL++ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC + Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCCQN 215
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 300.827 bits (769), Expect = 5.476e-81 Identity = 153/213 (71.83%), Postives = 181/213 (84.98%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+G+TIKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL++ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC + Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCCQN 215
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 299.671 bits (766), Expect = 1.220e-80 Identity = 153/213 (71.83%), Postives = 180/213 (84.51%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+G+TIKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL+ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC + Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCCQN 215
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 298.13 bits (762), Expect = 3.550e-80 Identity = 146/218 (66.97%), Postives = 188/218 (86.24%), Query Frame = 1 Query: 115 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNI---KEGQTIVVGGASEANTKKPCCSS 759 M R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFAT++LQ+EG+TIKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK +F+NV RWL+ELRDHADS+IVIMM+GNK+DL HLRAV+ ++ ++ AE+EGL F+ETSA+EA+NVE+AFQTI++E+Y I+++K+L++ E A ++ +G+TI + A+ NTK+ CCS+ Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAAAASAPLPSQGKTISIDSAA-GNTKRACCSA 217
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 6.055e-80 Identity = 146/212 (68.87%), Postives = 177/212 (83.49%), Query Frame = 1 Query: 124 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 R +++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL+V+G+ +KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKEL++H D NIV+M++GNK+DL+HL AV TED +SYAE+E L F+ETSALEA NVE AF +L++IYRI SKK + +GE +++ +G+ I V A K CCS+ Sbjct: 5 RVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKGEKIEVKNDVSALKKLGCCSN 216
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 296.59 bits (758), Expect = 1.033e-79 Identity = 145/211 (68.72%), Postives = 178/211 (84.36%), Query Frame = 1 Query: 124 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCS 756 R +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+LQV+G+ +KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TFENV RWLKELRDH D NIV+M++GNK+DL+HL AV T++ +++AERE L F+ETSALE+ NVE AF +L++IYRI+SK+S+ +G+ A S +G+ I + A K CCS Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSGPGKGEKINIKDDVSAVKKGGCCS 216
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 8.743e-79 Identity = 144/213 (67.61%), Postives = 181/213 (84.98%), Query Frame = 1 Query: 124 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKK-PCCSS 759 R +++YDYLFK+VLIGDSGVGKSNLLSRF+RNEF LESKSTIGVEFATR+++V+ + +KAQIWDTAGQERYRAITSAYYRGA+GAL+VYD+T+ TFENV RWLKELRDH D NIVIM++GNK DL+HLRAV+TEDA+++AERE F+ETSALE++NVE AF +L+EIY+++ +K+L G+ P+ + +GQTI VG + KK CCSS Sbjct: 6 RAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDD-PAALPKGQTINVGKDDVSAVKKVGCCSS 217
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.142e-78 Identity = 143/214 (66.82%), Postives = 178/214 (83.18%), Query Frame = 1 Query: 124 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNI--KEGQTIVVGGASEANTKKPCCSS 759 + D+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT++L ++G+ IKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TTFE RWLKELRDH D NIV+M+IGNK+DL+HL V+TED +++AE+E L F+ETSALEA NVE AF +L++IYRI+SK+++ +G+ +++ +GQTI V S + CCS+ Sbjct: 5 KADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |