FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 8.259e-45 Identity = 93/206 (45.15%), Postives = 136/206 (66.02%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT ++EG+T+K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ +A + +++GNK+D+ + V A+ +A+ + F+ETSA ++ NVE+AF T+ +I + + +S A S++K GQ G + + + CC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSN-AKSSVKVGQ-----GTNVSQSSSNCC 203
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.079e-44 Identity = 88/183 (48.09%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 687 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +HA +++ M++GNK D+ R V+ E + A G+ F+ETSA INVE AF T+ +I + KK L P SN Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKK-LEGNSPQGSN 186
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.079e-44 Identity = 87/170 (51.18%), Postives = 126/170 (74.12%), Query Frame = 1 Query: 127 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAER-EGLSFIETSALEAINVEKAFQTILSEI 633 PDE+YD+LFK+VL+GD+ VGK+ ++ RF F STIGV+F +TL+++G+ +K QIWDTAGQER+R IT +YYR A GA+L YD+TK ++F +V W++++R +A SNIV ++IGNK+DL LR V+ +AQS AE + L IETSA ++ NVE+AF + +E+ Sbjct: 11 PDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.409e-44 Identity = 92/213 (43.19%), Postives = 131/213 (61.50%), Query Frame = 1 Query: 124 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDL-KHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 R +YDYL K++LIGDSGVGKS LL RF+ F +TIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G LLVYDVT ++F N+ W++ + HA N+ +++GNK D+ + RAV T Q+ A+ G+ F ETSA +NVE+ F +I +I + ++ IK ++A K CC S Sbjct: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPSITIKPADQ----SGNQAAAKSACCGS 215
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.409e-44 Identity = 87/171 (50.88%), Postives = 122/171 (71.35%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISK 651 Y+Y+FK ++IGD GVGKS LL +FT N+F +S TIGVEF TR + V + IK QIWDTAGQER+RA+T +YYRGA GALLVYD+T+ T+ +++ WL + R+ + N VIM+IGNK DL+ R V E+A ++A++ GL F+E+SA NVE+AF I++ + + Sbjct: 5 YEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQE 175
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.840e-44 Identity = 88/183 (48.09%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 687 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +HA +++ M++GNK D+ R V+ E + A G+ F+ETSA INVE AF T+ +I + KK L P SN Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK-LEGNSPQGSN 186
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.840e-44 Identity = 88/183 (48.09%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 687 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +HA +++ M++GNK D+ R V+ E + A G+ F+ETSA INVE AF T+ +I + KK L P SN Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK-LEGNSPQGSN 186
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.840e-44 Identity = 88/183 (48.09%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 687 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +HA +++ M++GNK D+ R V+ E + A G+ F+ETSA INVE AF T+ +I + KK L P SN Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK-LEGNSPQGSN 186
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.840e-44 Identity = 88/183 (48.09%), Postives = 123/183 (67.21%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 687 YDYLFK++LIGDSGVGK+ L RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +FEN+ W++ + +HA ++ M++GNK D R V+ E + A G+ F+ETSA IN+E AF T+ +I + KK L P SN Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKK-LEGNSPQGSN 186
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.840e-44 Identity = 88/183 (48.09%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 687 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +HA +++ M++GNK D+ R V+ E + A G+ F+ETSA INVE AF T+ +I + KK L P SN Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK-LEGNSPQGSN 186 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |