FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB43_RAT (Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.558e-43 Identity = 86/169 (50.89%), Postives = 123/169 (72.78%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAER-EGLSFIETSALEAINVEKAFQTILSEI 633 DE YD+LFK+VL+GD+ VGK+ ++ RF F STIGV+F +TL+++G+ +K QIWDTAGQER+R IT +YYR A GA+L YD++K +TF +V W++++R +A SNIV ++IGNK+DL LR V +AQS AE + L IETSA ++ NVE+AF + +E+ Sbjct: 10 DEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.558e-43 Identity = 81/186 (43.55%), Postives = 131/186 (70.43%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI-YRIISKKSLSSGEPAPSNIK 693 YD+LFK++LIGDSGVGK+ L+ RF + F STIG++F RT+++EG+ IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN+ W+K ++++A + + +++GNK D++ R V E A A G+ F ETSA ++NV++AF ++ +I + ++S + +P+ +++K Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGNHSKPSSTDLK 190
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.558e-43 Identity = 88/205 (42.93%), Postives = 128/205 (62.44%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 YD LFK++LIGDSGVGK+ +L RF+ + F STIG++ +T++++G+ IK QIWDTAGQER+ IT++YYRGA+G +LVYD+T +FEN+S+WL+ + +HA+ ++ M++GNK D++ R V + A G+ F ETSA IN+EKAF T+ +I R K EP N+ + G K CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK-----EPNSENVD-----ISSGGGVTGWKSKCC 200
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.034e-43 Identity = 86/205 (41.95%), Postives = 128/205 (62.44%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 YD L K++LIGDSGVGKS LL RF ++F +TIG++F RT+ + + +K Q+WDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W + ++ +A+ + ++++GNK DL R V+TE Q+ A++ G+ F+E S+ INVE+ F ++ + I ++K + NI EG E N+ CC Sbjct: 8 YDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKGNESGSGGINIAEG---------EENSASKCC 203
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.034e-43 Identity = 81/182 (44.51%), Postives = 123/182 (67.58%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPS 684 YD+LFK++LIGDSGVGK+ L+ RF + F STIG++F RT+ +EG+ IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN+ W+K ++++A + + +++GNK D++ R V E A A G+ F ETSA ++NV++AF ++ +I + +G PS Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPS 186
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.034e-43 Identity = 81/182 (44.51%), Postives = 123/182 (67.58%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPS 684 YD+LFK++LIGDSGVGK+ L+ RF + F STIG++F RT+ +EG+ IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN+ W+K ++++A + + +++GNK D++ R V E A A G+ F ETSA ++NV++AF ++ +I + L + PS Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPS 186
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.470e-43 Identity = 80/186 (43.01%), Postives = 130/186 (69.89%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI-YRIISKKSLSSGEPAPSNIK 693 YD+LFK++LIGDSGVGK+ L+ RF + F STIG++F RT+ +EG+ IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN+ W+K ++++A + + +++GNK D++ R V E A+ A + F ETSA ++NV++AF ++ +I + ++S ++ +P+ + +K Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGTNSKPSSTGLK 190
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.532e-43 Identity = 97/209 (46.41%), Postives = 132/209 (63.16%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF----QTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKP 747 E YD+LFK ++IG +G GKS LL +F N+F +S TIGVEF +R + V G+T+K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ +++ WL + R A NIV+++ GNK DL R V +A +A+ L F+ETSAL NVE+AF +TIL++I SGE P + G I G AS ++P Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKI---------DSGELDPERM--GSGIQYGDASLRQLRQP 200
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.532e-43 Identity = 97/209 (46.41%), Postives = 132/209 (63.16%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF----QTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKP 747 E YD+LFK ++IG +G GKS LL +F N+F +S TIGVEF +R + V G+T+K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ +++ WL + R A NIV+++ GNK DL R V +A +A+ L F+ETSAL NVE+AF +TIL++I SGE P + G I G AS ++P Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKI---------DSGELDPERM--GSGIQYGDASLRQLRQP 200
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.532e-43 Identity = 85/169 (50.30%), Postives = 122/169 (72.19%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAER-EGLSFIETSALEAINVEKAFQTILSEI 633 DE YD+LFK+VL+GD+ VGK+ ++ RF F STIGV+F +TL+++G+ +K QIWDTAGQER+R IT +YYR A GA+L YD++K +TF +V W++++R +A SNIV ++IGNK+DL R V +AQS AE + L IETSA ++ NVE+AF + +E+ Sbjct: 10 DEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |