FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.730e-43 Identity = 84/184 (45.65%), Postives = 126/184 (68.48%), Query Frame = 1 Query: 124 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIY-RIISKKSLSSGE 672 R Y++LFK +++GDS VGKSNLL +F F S TIGVEF +R++ + + IK QIWDTAGQE++R+IT AYYRGA+ A++VYD+T+ +FE+++ WL + R + ++ ++IGNK DL+ R V+T +A+ +AE+ GL F ETSA A+NV++AF+ +I ++ S L S E Sbjct: 16 RKSTSYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGLLSNE 199
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.730e-43 Identity = 90/206 (43.69%), Postives = 130/206 (63.11%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCS 756 YD LFK++LIGDSGVGK+ +L RF+ + F STIG++F +T+++ G+ IK QIWDTAGQER+ IT++YYRGA+G +LVYD+T +FEN+S+WL+ + +HA+ ++ M++GNK D++ R V + A + F ETSA IN+EKAF T+ +I + K EP N+ T GG + K CCS Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTPVK-----EPDRENVDISTT---GGGTGL---KKCCS 200
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.010e-42 Identity = 84/164 (51.22%), Postives = 118/164 (71.95%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSR-WLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTI 621 +EYDYLFK+++IGDSG GKS+LL RF N + STIGV+F +T++++ TIK QIWDTAGQER+R ITS YYRGA G + VYDVT +F++++ WL+++ +A SN+ ++IGNK DL R V+ ++A+ AE+ +++IE SA NVEKAF TI Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTI 165
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.319e-42 Identity = 95/205 (46.34%), Postives = 126/205 (61.46%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKP 747 E YD+LFK ++IG +G GKS LL +F N+F +S TIGVEF +R + V G+T+K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R A NIVI++ GNK DL R V +A +A+ L F+ETSAL NVE+AF I + SGE P + G I G AS ++P Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARSI-----PNKIESGELDPERM--GSGIQYGDASLRQIRQP 200
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.319e-42 Identity = 92/206 (44.66%), Postives = 128/206 (62.14%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 +YD+LFK+++IGDSGVGKS+LL RF N F +TIGV+F RT+++ G +K QIWDTAGQER+R ITS YYRG G ++VYDVT +F NV RWL E+ + D ++ +++GNK D + V TEDA +A + G+ ETSA E +NVE+ F I + R K +L+ + ++ Q VV + KK CC Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR-AKKDNLAKQQ------QQQQNDVVKLTKNSKRKKRCC 201
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.319e-42 Identity = 92/206 (44.66%), Postives = 128/206 (62.14%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 +YD+LFK+++IGDSGVGKS+LL RF N F +TIGV+F RT+++ G +K QIWDTAGQER+R ITS YYRG G ++VYDVT +F NV RWL E+ + D ++ +++GNK D + V TEDA +A + G+ ETSA E +NVE+ F I + R K +L+ + ++ Q VV + KK CC Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR-AKKDNLAKQQ------QQQQNDVVKLTKNSKRKKRCC 201
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.319e-42 Identity = 92/206 (44.66%), Postives = 128/206 (62.14%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 +YD+LFK+++IGDSGVGKS+LL RF N F +TIGV+F RT+++ G +K QIWDTAGQER+R ITS YYRG G ++VYDVT +F NV RWL E+ + D ++ +++GNK D + V TEDA +A + G+ ETSA E +NVE+ F I + R K +L+ + ++ Q VV + KK CC Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR-AKKDNLAKQQ------QQQQNDVVKLTKNSKRKKRCC 201
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.319e-42 Identity = 86/166 (51.81%), Postives = 119/166 (71.69%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 633 E+D+ FK++LIGDSGVGKS LL RF + + STIGV+F +TL ++G+TIK QIWDTAGQER+R ITS+YYRGA G +LVYD T +F NV +W+ E+ +A N+ +++GNKTDL + + V + A+S+AE G+ FIETSA A NVE+ F ++ +I Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.722e-42 Identity = 96/209 (45.93%), Postives = 131/209 (62.68%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF----QTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKP 747 E YD+LFK ++IG +G GKS LL +F N+F +S TIGVEF +R + V G+T+K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ +++ WL + R A NIV+++ GNK DL R V +A +A+ L F+ETSAL NVE+AF +TIL++I SGE P + G I G S ++P Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKI---------DSGELDPERM--GSGIQYGDISLRQLRQP 200
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.722e-42 Identity = 96/209 (45.93%), Postives = 131/209 (62.68%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAF----QTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKP 747 E YD+LFK ++IG +G GKS LL +F N+F +S TIGVEF +R + V G+T+K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ +++ WL + R A NIV+++ GNK DL R V +A +A+ L F+ETSAL NVE+AF +TIL++I SGE P + G I G S ++P Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKI---------DSGELDPERM--GSGIQYGDISLRQLRQP 200 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |