FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.749e-40 Identity = 90/224 (40.18%), Postives = 133/224 (59.38%), Query Frame = 1 Query: 115 MARRPDE-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDL-KHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI----------YRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPC 750 MAR P +YD L K++L+GDSGVGKS LL RFT + F +TIG++F + + V+G+ +K QIWDTAGQER+R ITSAYYRGA G +LVYD+T +F NV W++ + HA N+ +++GNK DL + R V+ Q+ A+ G F ETSA + ++VE+AF + ++ +++ ++ LS+ +P + G S A K C Sbjct: 1 MARIPGRPDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQQLLQQQQLSAAQPV--------RLTSGSPSPAQGKSCC 216
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 3.591e-40 Identity = 91/205 (44.39%), Postives = 125/205 (60.98%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKP 747 E YD+LFK ++IG++G GKS LL +F +F +S TIGVEF ++ + V G+ +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R A NIVI++ GNK DL R V +A +A+ L F+ETSAL NVE+AF +I + SGE P + G I G A+ + P Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKIL-----NKIESGELDPERM--GSGIQYGDAALRQLRSP 200
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 3.591e-40 Identity = 91/205 (44.39%), Postives = 125/205 (60.98%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKP 747 E YD+LFK ++IG++G GKS LL +F +F +S TIGVEF ++ + V G+ +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R A NIVI++ GNK DL R V +A +A+ L F+ETSAL NVE+AF +I + SGE P + G I G A+ + P Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKIL-----NKIESGELDPERM--GSGIQYGDAALRQLRSP 200
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.690e-40 Identity = 80/166 (48.19%), Postives = 113/166 (68.07%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESK-STIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 633 YD FKV+L+GDSGVGK+ LL RF F + ST+G++F + + V+G +K QIWDTAGQER+R++T AYYR A LL+YDVT +F+++ WL E+++HA ++V+M++GNK D RAV EDA+ A+ GL F+ETSA +NV+ AF I E+ Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB39B_MOUSE (Ras-related protein Rab-39B OS=Mus musculus GN=Rab39b PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.000e-40 Identity = 81/178 (45.51%), Postives = 120/178 (67.42%), Query Frame = 1 Query: 145 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVE-GRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADS-NIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE 672 Y F++++IGDS VGKS L+ RFT F S T+GV+F +R +++E G+ IK QIWDTAGQER+R+IT AYYR ++G LL++D+T +F+NV WL+E + H IV +++G+K DL R V +A+ A G+ +IETSA +AINVEKAF + +IY ++ + ++ E Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQE 184
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB39B_HUMAN (Ras-related protein Rab-39B OS=Homo sapiens GN=RAB39B PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.000e-40 Identity = 81/178 (45.51%), Postives = 120/178 (67.42%), Query Frame = 1 Query: 145 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVE-GRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADS-NIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE 672 Y F++++IGDS VGKS L+ RFT F S T+GV+F +R +++E G+ IK QIWDTAGQER+R+IT AYYR ++G LL++D+T +F+NV WL+E + H IV +++G+K DL R V +A+ A G+ +IETSA +AINVEKAF + +IY ++ + ++ E Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQE 184
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB39B_BOVIN (Ras-related protein Rab-39B OS=Bos taurus GN=RAB39B PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.000e-40 Identity = 81/178 (45.51%), Postives = 120/178 (67.42%), Query Frame = 1 Query: 145 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVE-GRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADS-NIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE 672 Y F++++IGDS VGKS L+ RFT F S T+GV+F +R +++E G+ IK QIWDTAGQER+R+IT AYYR ++G LL++D+T +F+NV WL+E + H IV +++G+K DL R V +A+ A G+ +IETSA +AINVEKAF + +IY ++ + ++ E Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGDITIQE 184
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.000e-40 Identity = 89/205 (43.41%), Postives = 125/205 (60.98%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKP 747 E YD+LFK ++IG++G GKS LL +F +F +S TIG+EF ++ + V G+ +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R A NIV+++ GNK DL R V +A +A+ L F+ETSAL NVE+AF +I + SGE P + G I G A+ + P Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKIL-----NKIESGELDPERM--GSGIQYGDAALRQLRSP 200
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.365e-39 Identity = 77/187 (41.18%), Postives = 124/187 (66.31%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREG-LSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 687 D+ +D+LFK++LIGDS VGK+ ++ RF F ++TIGV+F R + + G+ +K Q+WDTAGQER+R IT +YYR A GA++ YD+T+ +FE+V W+ E + +N+++M+IGNK+DL R + E+A + AE+ G L+ +ETSA E+ NV++ F + E +I++ + +P N Sbjct: 9 DDPFDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKE---LIARNTFHYHSESPRN 192
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.782e-39 Identity = 78/166 (46.99%), Postives = 111/166 (66.87%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESK-STIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 633 YD FKV+L+GDSGVGK+ LL RF F + ST+G++F + L V+G +K QIWDTAGQER+R++T AYYR A LL+YD+T +F+N+ WL E++++A ++V+M++GNK D R V ED + A+ GL F+ETSA +NV+ AF I E+ Sbjct: 61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKEL 226 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |