FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB4A_DANRE (Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 2.328e-39 Identity = 90/205 (43.90%), Postives = 123/205 (60.00%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKP 747 E YD+LFK ++IG++G GKS LL +F F +S TIGVEF ++ + V + +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R A NIVI++ GNK DL R V +A +A+ L F+ETSAL NVE+AF +I + SGE P + G I G A+ + P Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKIL-----NKIESGELDPERM--GSGIQYGDAALRQLRSP 200
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.040e-39 Identity = 78/166 (46.99%), Postives = 111/166 (66.87%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESK-STIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 633 YD FKV+L+GDSGVGK+ LL RF F + ST+G++F + L V+G +K QIWDTAGQER+R++T AYYR A LL+YD+T +F+N+ WL E++++A ++V+M++GNK D R V ED + A+ GL F+ETSA +NV+ AF I E+ Sbjct: 64 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKEL 229
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 3.040e-39 Identity = 78/166 (46.99%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESK-STIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 633 YD FKV+L+GDSGVGK+ LL RF F + ST+G++F + L V+G +K Q+WDTAGQER+R++T AYYR A LL+YDVT +F+N+ WL E+ ++A ++ +M++GNK D H R V ED + A+ GL F+ETSA +NV+ AF I E+ Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.970e-39 Identity = 81/191 (42.41%), Postives = 127/191 (66.49%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQT 705 ++Y++LFK + +GDSGVGKS++L RFT + F STIGV+F +T+ +EG+ IK QIWDTAGQER+R ++ YRG ++VYDVT +FENV++W++E+ +A N++ M+IGNK+D+ + V AQ +A+ ++F ETSA +AIN+E AF +++ I + SS + +K+ Q+ Sbjct: 3 KKYEHLFKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQKVVDPFLAQEFADSLDITFKETSAKQAINIEDAFISLVKLCIDRIEEFKPSSTSSSTIILKKPQS 193
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.970e-39 Identity = 91/204 (44.61%), Postives = 126/204 (61.76%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVG-GASEANTKKPCCSS 759 FK+VL+G+S VGKS+L+ RF + +F +STIG F T+T+ ++ T+K +IWDTAGQERY ++ YYRGA A++VYD+T TF W+KEL+ A NIVI + GNK DL RAV +DAQ+YA+ L F+ETSA A+NV +EI+ I+KK L EP + G+ VV S ++ CCS+ Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNV--------NEIFMAIAKK-LPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN 216
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.970e-39 Identity = 82/208 (39.42%), Postives = 125/208 (60.10%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 D+ +DY+FK++LIG+S VGK++ L R+ + F ST+G++F +T+ + IK QIWDTAGQERYR IT+AYYRGA+G LL+YD+ +F V W +++ ++ N ++++GNK DL+ R V ED + A+ G F E SA E INV++ F+ ++ +I +K S EP+ S+ G+ VG A C Sbjct: 16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVD----VICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC 219
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.970e-39 Identity = 75/190 (39.47%), Postives = 125/190 (65.79%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEG 699 D+ +DY+FK+++IG+S VGK++ L R+ + F ST+G++F +T+ + IK QIWDTAGQERYR IT+AYYRGA+G +L+YD+T +F V W +++ ++ N ++++GNK D++ R V++E + A+ G F E SA + INV++ F+ ++ I +S +SL + +PA + K+G Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMS-ESLDTADPAVTGAKQG 204
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.970e-39 Identity = 75/190 (39.47%), Postives = 125/190 (65.79%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEG 699 D+ +DY+FK+++IG+S VGK++ L R+ + F ST+G++F +T+ + IK QIWDTAGQERYR IT+AYYRGA+G +L+YD+T +F V W +++ ++ N ++++GNK D++ R V++E + A+ G F E SA + INV++ F+ ++ I +S +SL + +PA + K+G Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMS-ESLDTADPAVTGAKQG 204
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.970e-39 Identity = 75/190 (39.47%), Postives = 125/190 (65.79%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEG 699 D+ +DY+FK+++IG+S VGK++ L R+ + F ST+G++F +T+ + IK QIWDTAGQERYR IT+AYYRGA+G +L+YD+T +F V W +++ ++ N ++++GNK D++ R V++E + A+ G F E SA + INV++ F+ ++ I +S +SL + +PA + K+G Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMS-ESLDTADPAVTGAKQG 204
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.970e-39 Identity = 75/190 (39.47%), Postives = 125/190 (65.79%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEG 699 D+ +DY+FK+++IG+S VGK++ L R+ + F ST+G++F +T+ + IK QIWDTAGQERYR IT+AYYRGA+G +L+YD+T +F V W +++ ++ N ++++GNK D++ R V++E + A+ G F E SA + INV++ F+ ++ I +S +SL + +PA + K+G Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMS-ESLDTADPAVTGAKQG 204 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |