FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.970e-39 Identity = 75/190 (39.47%), Postives = 125/190 (65.79%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEG 699 D+ +DY+FK+++IG+S VGK++ L R+ + F ST+G++F +T+ + IK QIWDTAGQERYR IT+AYYRGA+G +L+YD+T +F V W +++ ++ N ++++GNK D++ R V++E + A+ G F E SA + INV++ F+ ++ I +S +SL + +PA + K+G Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMS-ESLDTADPAVTGAKQG 204
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 3.970e-39 Identity = 75/190 (39.47%), Postives = 125/190 (65.79%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEG 699 D+ +DY+FK+++IG+S VGK++ L R+ + F ST+G++F +T+ + IK QIWDTAGQERYR IT+AYYRGA+G +L+YD+T +F V W +++ ++ N ++++GNK D++ R V++E + A+ G F E SA + INV++ F+ ++ I +S +SL + +PA + K+G Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMS-ESLDTADPAVTGAKQG 204
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB19_XENLA (Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.970e-39 Identity = 77/187 (41.18%), Postives = 125/187 (66.84%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREG-LSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 687 D+ +D+LFK++LIGDS VGK+ ++ RF F ++TIGV+F R+L + G+ +K Q+WDTAGQER+R IT +YYR A GA++ YD+T+ +FE+V W+ E + +N+++M++GNK+DL R + E+A + AE+ G L+ +ETSA E+ NV++ F + E +I++ + +P N Sbjct: 9 DDPFDFLFKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAGKYGAANLMLMLMGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKE---LIARNTFHYHNESPRN 192
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 5.185e-39 Identity = 85/202 (42.08%), Postives = 122/202 (60.40%), Query Frame = 1 Query: 148 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 +FK++LIGDS VGK++LL RF N F S + V++ + + ++GRT QIWDTAGQER+R ITS++YRGA G L+ YDVT T+ NV W++E++ +A + +++GNK DL+ + V T A+ YA+ G+ F+E SA +NVE+AF + +EIYR G PS + G GG S KK C Sbjct: 6 VFKILLIGDSAVGKTSLLLRFADNSFQETSVNMTSVDYKNKNIVIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCDLEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIYR------NHMGGSKPSVVNPGS----GGTSNTGGKKKFC 197
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.185e-39 Identity = 84/208 (40.38%), Postives = 132/208 (63.46%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSL------SSGEPAPSNIKEGQTIVVGGASEANT 738 ++YD LF+++LIGDSGVGK+ LL RFT NEF STIGV+F +T++V+G ++ QIWDTAGQERY+ IT YYR A G LVYD++ +++++ +W+ ++ ++A + ++IGNK D + R V E Q A+ G+ F ETSA +N++++F T L+E+ +K L +S E A + ++E + G A+ + T Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF-TRLTELVLQAHRKELDGLRTCASNELALAELEEDEGKTEGPANSSKT 209
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 6.772e-39 Identity = 90/204 (44.12%), Postives = 126/204 (61.76%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVG-GASEANTKKPCCSS 759 FK+VL+G+S VGKS+L+ RF + +F +STIG F T+T+ ++ T+K +IWDTAGQERY ++ YYRGA A++VYD+T TF W+KEL+ A NIVI + GNK DL RAV ++AQ+YA+ L F+ETSA A+NV +EI+ I+KK L EP + G+T V S ++ CCS+ Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNV--------NEIFMAIAKK-LPKNEPQNAAGAPGRTRGVDLQESNPASRSQCCSN 216
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.155e-38 Identity = 82/209 (39.23%), Postives = 131/209 (62.68%), Query Frame = 1 Query: 124 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEAN-TKKP 747 +PD+ +DY+FK+++IG+S VGK++ L R+ + F ST+G++F +T+ + +K QIWDTAGQERYR IT+AYYRGA+G +L+YD+T +F +V W +++ ++ N ++++GNK D+ R V+ + + A++ GL F ETSA E INV+ F+ ++ II K S + P +GQ + EAN T+KP Sbjct: 14 QPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFE----KLVEIICDKMAESLDKDPQQQPKGQKL------EANPTQKP 212
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.155e-38 Identity = 74/183 (40.44%), Postives = 121/183 (66.12%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAP 681 E+YD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F +T+++ G +K QIWDTAGQER+R+IT +YYR A +L YD+T +F + WL+E+ +A + ++ +++GNK DL R V+ + A+ ++E + + ++ETSA E+ NVEK F + + + +L + +P Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.155e-38 Identity = 74/183 (40.44%), Postives = 121/183 (66.12%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAP 681 E+YD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F +T+++ G +K QIWDTAGQER+R+IT +YYR A +L YD+T +F + WL+E+ +A + ++ +++GNK DL R V+ + A+ ++E + + ++ETSA E+ NVEK F + + + +L + +P Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.155e-38 Identity = 74/183 (40.44%), Postives = 121/183 (66.12%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAP 681 E+YD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F +T+++ G +K QIWDTAGQER+R+IT +YYR A +L YD+T +F + WL+E+ +A + ++ +++GNK DL R V+ + A+ ++E + + ++ETSA E+ NVEK F + + + +L + +P Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |