FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.155e-38 Identity = 84/208 (40.38%), Postives = 132/208 (63.46%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSL------SSGEPAPSNIKEGQTIVVGGASEANT 738 ++YD LF+++LIGDSGVGK+ LL RFT NEF STIGV+F +T++V+G ++ QIWDTAGQERY+ IT YYR A G LVYD++ +++++ +W+ ++ ++A + ++IGNK D + R V E Q A+ G+ F ETSA +N++++F T L+E+ +K L +S E A + ++E + G A+ + T Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF-TRLTELVLQAHRKELEGLRMRASNELALAELEEEEGKPEGPANSSKT 209
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.509e-38 Identity = 77/173 (44.51%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKK 654 EYD L K+++IGDSGVGKS +L RF N F STIGV+F RT++++G+ IK QIWDTAGQER++ IT++YYRGA G ++VYD+T +F ++ RWL ++ A +++ +++GNK DL RAV + A+ +A+ + +ETSA E+ +++AF + S+I + +K Sbjct: 29 EYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIKKSTPQK 201
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB15_MOUSE (Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.509e-38 Identity = 84/208 (40.38%), Postives = 131/208 (62.98%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSL------SSGEPAPSNIKEGQTIVVGGASEANT 738 ++YD LF+++LIGDSGVGK+ LL RFT NEF STIGV+F +T+ V+G ++ QIWDTAGQERY+ IT YYR A G LVYD++ +++++ +W+ ++ ++A + ++IGNK D + R V E Q A+ G+ F ETSA +N++++F T L+E+ +K L +S E A + ++E + G A+ + T Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIDVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF-TRLTELVLQAHRKELDGLRTRASNELALAELEEDEGKPEGPANSSKT 209
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.573e-38 Identity = 78/161 (48.45%), Postives = 108/161 (67.08%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 633 FK+VL+G+S VGKS+L+ RF + +F +STIG F T+T+ ++ T+K +IWDTAGQERY ++ YYRGA A++VYD+T TF W+KEL+ A NIVI + GNK DL RAV ++AQ+YAE L F+ETSA A+NV + F I ++ Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.361e-38 Identity = 88/204 (43.14%), Postives = 125/204 (61.27%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVG-GASEANTKKPCCSS 759 FK+VL+G+S VGKS+L+ RF + +F +STIG F T+T+ ++ T+K +IWDTAGQERY ++ YYRGA A++VYD+T TF W+KEL+ A NIVI + GNK DL RAV ++AQ+YA+ L F+ETSA A+NV +EI+ I+KK L EP + G+ V + ++ CCS+ Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNV--------NEIFMAIAKK-LPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN 216
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 3.361e-38 Identity = 88/204 (43.14%), Postives = 125/204 (61.27%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVG-GASEANTKKPCCSS 759 FK+VL+G+S VGKS+L+ RF + +F +STIG F T+T+ ++ T+K +IWDTAGQERY ++ YYRGA A++VYD+T TF W+KEL+ A NIVI + GNK DL RAV ++AQ+YA+ L F+ETSA A+NV +EI+ I+KK L EP + G+ V + ++ CCS+ Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNV--------NEIFMAIAKK-LPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN 216
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.390e-38 Identity = 88/205 (42.93%), Postives = 129/205 (62.93%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEP--APSNIKEGQTIVVGGASEANTKKPCCSS 759 FK+VL+G+S VGKS+L+ RF + +F +STIG F T+T+ ++ T+K +IWDTAGQERY ++ YYRGA A++VYD+T +F W+KEL+ A NIVI + GNK DL + RAV ++AQSYA+ L F+ETSA ++NV +EI+ I+KK L EP +N G+ + + ++ T+ CCS+ Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNV--------NEIFMAIAKK-LPKNEPQNPGANSARGRGVDLTEPTQP-TRSQCCSN 215
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 4.390e-38 Identity = 88/205 (42.93%), Postives = 129/205 (62.93%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEP--APSNIKEGQTIVVGGASEANTKKPCCSS 759 FK+VL+G+S VGKS+L+ RF + +F +STIG F T+T+ ++ T+K +IWDTAGQERY ++ YYRGA A++VYD+T +F W+KEL+ A NIVI + GNK DL + RAV ++AQSYA+ L F+ETSA ++NV +EI+ I+KK L EP +N G+ + + ++ T+ CCS+ Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNV--------NEIFMAIAKK-LPKNEPQNPGANSARGRGVDLTEPTQP-TRNQCCSN 215
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.390e-38 Identity = 88/205 (42.93%), Postives = 129/205 (62.93%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEP--APSNIKEGQTIVVGGASEANTKKPCCSS 759 FK+VL+G+S VGKS+L+ RF + +F +STIG F T+T+ ++ T+K +IWDTAGQERY ++ YYRGA A++VYD+T +F W+KEL+ A NIVI + GNK DL + RAV ++AQSYA+ L F+ETSA ++NV +EI+ I+KK L EP +N G+ + + ++ T+ CCS+ Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNV--------NEIFMAIAKK-LPKNEPQNPGANSARGRGVDLTEPTQP-TRSQCCSN 215
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.390e-38 Identity = 88/205 (42.93%), Postives = 129/205 (62.93%), Query Frame = 1 Query: 151 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEP--APSNIKEGQTIVVGGASEANTKKPCCSS 759 FK+VL+G+S VGKS+L+ RF + +F +STIG F T+T+ ++ T+K +IWDTAGQERY ++ YYRGA A++VYD+T +F W+KEL+ A NIVI + GNK DL + RAV ++AQSYA+ L F+ETSA ++NV +EI+ I+KK L EP +N G+ + + ++ T+ CCS+ Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNV--------NEIFMAIAKK-LPKNEPQNPGANSTRGRGVDLTEPTQP-TRSQCCSN 215 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |