FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 272.322 bits (695), Expect = 2.086e-72 Identity = 139/214 (64.95%), Postives = 171/214 (79.91%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAP----SNIKEGQTIVVGGASEA-NTKKPCCSS 759 ++ DY+FKVVLIGDS VGKS LL+RF RNEF L+SK+TIGVEF TRTL ++ RT+KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++V+RWL+ELR HAD NIVIM+IGNK+DL LR V TEDA+ +AERE L F+ETSALE+ NVE AF T+L+EIYRI+SKK+L + E S++ +G IVV G A TK CC S Sbjct: 13 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.558e-72 Identity = 134/207 (64.73%), Postives = 171/207 (82.61%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 EEYDYL+K+VLIGDSGVGKSNLLSRFTRNEF LE+KSTIGVEFATRT+Q EG+TIKAQ+WDTAGQERYRAITSAYYRGA+GALLVYD+ K T+++V RW+ ELR++AD NI IM++GNK+DL+HLR V+T++A+ ++E+ L+FIETSAL++ NVE AFQ IL++IY I+S+ S S+G P + +TI++ SE K C Sbjct: 8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTG-PQTTIDSNTETIILPTTSEPPAAKSGC 213
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 7.418e-70 Identity = 133/212 (62.74%), Postives = 168/212 (79.25%), Query Frame = 1 Query: 142 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSL----SSGEPAPSNIKEGQTIVVGGASEANTKK-PCCSSS 762 DY+FKVVLIGDS VGKS +L+RF RNEF L+SKSTIGVEF TRTL ++ +T+KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+TK TF+++ RWL+ELR+HAD NIVI++IGNK DL + R V TEDA+ +AE+EGL F+ETSALEA NVE AF T+L+EIY I++KKSL S G +++ + I+ G A E K+ CC +S Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 9.689e-70 Identity = 128/213 (60.09%), Postives = 171/213 (80.28%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPA----PSNIKEGQTIVVGGASEANTKKPCCSS 759 ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ +++KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+TK TF+++ RWL+ELR HAD NIVIM+IGNKTDL+ RAV TEDA+ +A++EGL F+ETSA+EA N+E AF T+L+EI+ I++KK+L++ + P+++ + +V G KK CCSS Sbjct: 10 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLTGKKILVPGPGQVIPEKKACCSS 222
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.117e-68 Identity = 126/213 (59.15%), Postives = 169/213 (79.34%), Query Frame = 1 Query: 133 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE----PAPSNIKEGQTIVVGGASEANTKKPCCSS 759 ++ DY+FKVVLIGDS VGK+ +L+RF RNEF L+SK+TIGVEF TRTL ++ +++KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+TK TF+++ RWL+ELR HAD NIVIM+ GNKTDL+ RAV TEDA+ +A++EGL F+ETSA+EA +E AF T+L+EI+ I++KK+L++ E P+++ + +V G KK CCSS Sbjct: 10 QKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 246.128 bits (627), Expect = 1.601e-64 Identity = 115/188 (61.17%), Postives = 156/188 (82.98%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEG 699 +YD LFK+VLIGDSGVGKSNLLSRFT+NEF ++SKSTIGVEFATRTL+++G+ IKAQIWDTAGQERYRAITSAYYRGA+GAL+VYD++K +++EN + WL ELR++AD N+ + +IGNK+DL HLRAV TE+++++A+ L F ETSAL + NV+KAF+ +++ IY+ +SK + G+ + + G Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSANGNANG 196
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 242.276 bits (617), Expect = 2.311e-63 Identity = 121/214 (56.54%), Postives = 164/214 (76.64%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNI-----KEGQTIVVGGASEANTKKP---CC 753 +YDYLFK+VLIGDSGVGKSNLLSRFT +EF +ESKSTIGVEFATRT++VE + IKAQIWDTAGQERYRAITSAYYRGA+GAL+VYD++K +++EN + WL ELR++AD N+ + +IGNK+DL HLRAV T++A+++A + F ETSAL + NV+KAF+ ++ I++++SK + +N+ +G TI + A + + KK CC Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 2.311e-63 Identity = 123/215 (57.21%), Postives = 159/215 (73.95%), Query Frame = 1 Query: 115 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 M R DE+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ + +KAQIWDTAG ERYRAITSAYYRGA+GALLV+D+TK T+ V RWLKEL DHA++ IV+M++GNK+DL R V TE+A +AE GL F+ETSAL++ NVE AFQT+L EI+ +SK+ +S + + Q G E K+ CC S Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNSTRTSAITLGNAQAGQDPGPGE---KRACCIS 212
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.556e-62 Identity = 121/215 (56.28%), Postives = 159/215 (73.95%), Query Frame = 1 Query: 115 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 M R +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ + IKAQIWDTAG ERYRAITSAYYRGA+GALLV+D+TK T+ V RWLKEL DHA++ IV+M++GNK+DL R V TE+A+ +AE GL F+ETSAL++ NVE AF+T+L EI+ +SK+ ++ + G G E K+ CC S Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNNARTNAVTLGSGPAGQELGPGE---KRACCIS 212
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 236.498 bits (602), Expect = 1.268e-61 Identity = 120/215 (55.81%), Postives = 158/215 (73.49%), Query Frame = 1 Query: 115 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ + +KAQIWDTAG ERYRAITSAYYRGA+GALLV+D+TK T+ V RWLKEL DHA++ IV+M++GNK+DL R V TE+A+ +AE GL F+ETSAL++ NVE AF+T+L EI+ +SK+ +S + Q G E K+ CC S Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRTNAITLGSAQAGQEPGPGE---KRACCIS 212 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |