FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.820e-61 Identity = 120/213 (56.34%), Postives = 159/213 (74.65%), Query Frame = 1 Query: 115 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ + +KAQIWDTAG ERYRAITSAYYRGA+GALLV+D+TK T+ V RWLKEL DHA++ IV+M++GNK+DL R V TE+A+ +AE GL F+ETSAL++ NVE AF+T+L EI+ +SK+ +S P + I G + G K+ CC Sbjct: 1 MGNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQIQNS--PRSNAIALG-SAQAGQEPGPGQKRACC 210
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.820e-61 Identity = 112/210 (53.33%), Postives = 163/210 (77.62%), Query Frame = 1 Query: 142 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVV---GGASEANTKKPCCSSS 762 +YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++++EG+ +KAQIWDTAGQER+RA+TSAYYRGA+GAL+VYD+T+ TTFE+V RWL EL+ H+D+ + M++GNK DL+++RAV+ E+ ++ AE EGL F+ETSAL++ NV+ AF+ ++ +IY +S+K L+S + + + +V AS+ ++ CCSS+ Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNS-DTYKDELTVNRVSLVKDDNSASKQSSGFSCCSST 218
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.392e-60 Identity = 112/205 (54.63%), Postives = 155/205 (75.61%), Query Frame = 1 Query: 142 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCS 756 +YLFK+V+IGDS VGKSNLL+R+ RNEF SK+TIGVEF T+++ ++G+ +KAQIWDTAGQER+RA+TSAYYRGA+GAL+VYD+T+ +TFENV RWL EL H+D+ + M+IGNK DL+ +RAV+ E+ +S AE EGL F+ETSAL++ NV+ AF+ ++ EIY IS+K L+S + + + +V +E CCS Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNS-DSYKEELTVNRVSLVKNENEGTKTFSCCS 213
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.508e-58 Identity = 100/175 (57.14%), Postives = 147/175 (84.00%), Query Frame = 1 Query: 130 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKK 654 +EE +YLFK+V+IGDS VGKSNLL+RFTRNEF ++K+TIGV+F T++++++ +TI AQ WDTAGQER+RA+TS YYRGA+GA++VYD+T +F+NV+RWL ELR+ A+ +I+IMM+GNK+DL+ R V T++AQ++AE +SF+ETSAL + NV ++F+ +L++IY ++S K Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSK 178
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.828e-50 Identity = 91/172 (52.91%), Postives = 132/172 (76.74%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISK 651 EYDYL K+V+IGDSGVGKSNLLSR+ +NEF + STIGVEF+T+TL+++ + IK Q+WDTAGQE+Y +IT +YY+GA+GAL+VY++ +F N+ +WLK+ R++A + IM++GNK+DLK R V+T + + +AE+ + FIETSAL++ NVE AF + + IY + K Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIYYSLFK 178
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.481e-49 Identity = 103/218 (47.25%), Postives = 138/218 (63.30%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIIS-------------KKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++G+ IK QIWDTAGQE +R+IT +YYRGA GALLVYD+T+ TF +++ WL++ R HA+ N+ IM+IGNK DL H RAV TE+ + +A+ GL F+ETSA A NVE+AF EIY+ I K G P +K G+ GGA+++++ CC Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGGGNAGPQTVKPGE----GGAAKSSS---CC 213
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.231e-48 Identity = 100/208 (48.08%), Postives = 138/208 (66.35%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++ +G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ +A N+ +++GNK+DL + VATE A+++A+ G+ F+ETSA A NV++AF + + I K + +PA +N + + G N K CCSS Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASI------KDRMASQPAAANARPATVQIRG--QPVNQKTSCCSS 203
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.743e-48 Identity = 101/206 (49.03%), Postives = 138/206 (66.99%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ +A N+ +++GNK+DL R V+T+ A+ +AE G+ F+ETSA A NVEKAF + ++I KK +++ AP K G + G +N CC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI-----KKRMANAPVAP---KAGVKLTPGQQVPSNGGSKCC 201
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.679e-48 Identity = 101/218 (46.33%), Postives = 132/218 (60.55%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIIS-------------KKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++G+ IK QIWDTAGQE +R+IT +YYRGA GALLVYD+T+ TF +++ WL++ R HA+ N+ IM+IGNK DL H RAV TE+ + +A+ GL F+ETSA A NVE+AF EIY+ I K +G P K G+ +A CC Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGAGNAGPQAAKPGE-------GDARKSSSCC 213
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.111e-48 Identity = 97/213 (45.54%), Postives = 137/213 (64.32%), Query Frame = 1 Query: 124 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDL-KHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 R +YDYL K++LIGDSGVGKS LL RF+ F +TIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G LLVYDVT ++F N+ W++ + HA N+ +++GNK D+ + RAV T Q+ A+ G+ F ETSA +NVE+ F +I +I + +S + P+ IK QT GA +A K CC + Sbjct: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSD---TDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |