FC929776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 190.274 bits (482), Expect = 1.042e-47 Identity = 100/208 (48.08%), Postives = 141/208 (67.79%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 759 EYDYLFK++LIGDSGVGKS LL RF+ + + STIGV+F RT++ +G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ +A N+ +++GNK+DL RA+ E A+++A+ G+ F+ETSA +A NVE+AF + + I K + +PA +N + T+ + G A K CCS+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASI------KERMASQPAGNNARP-PTVQIRGQPVAQ-KNGCCST 203
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.322e-47 Identity = 101/211 (47.87%), Postives = 135/211 (63.98%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPA------PSNIKEGQTIVVGGASEANTKKPCC 753 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++G+ IK QIWDTAGQE +R+IT +YYRGA GALLVYD+T+ TF +++ WL++ R H++SN+VIM+IGNK+DL+ R V E+ +++A GL F+ETSA A NVE+AF EIY+ I A P + Q++ VGG S N CC Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINNEANGIKIGPQHSPASQSLNVGG-SGGNQGGNCC 212
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 3.033e-47 Identity = 101/207 (48.79%), Postives = 138/207 (66.67%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCS 756 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++ +G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ +A N+ +++GNK DL R V+ E ++ A+ G+ F+ETSA +A NVEKAF T+ EI K+ + +PA +N + T+ + G A + CCS Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI------KNRMASQPA-TNASKPATVQMRGQPVAQ-QSSCCS 202
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.152e-46 Identity = 101/206 (49.03%), Postives = 136/206 (66.02%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEG-----QTIVVGGASEANTK 741 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++G+ IK QIWDTAGQE +R+IT +YYRGA GALLVYD+T+ TF +++ WL++ R H+ SN+VIM+IGNK+DL+ R V E+ +++A GL F+ETSA A NVE+AF EIYR I ++ L + IK G T V AS+ N++ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKI-QQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSR 207
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.966e-46 Identity = 102/214 (47.66%), Postives = 141/214 (65.89%), Query Frame = 1 Query: 136 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPA----PSNI--KEGQTIVVGGASEANTKKPCCSS 759 E+DYLFK++LIGDS VGKS L RF + + STIGV+F RT++VEG+T+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV +WL E+ +A+ ++ +++GNK DL RAV T AQ+YA+ G+ F+ETSA E+INVE+AF + + I KKS + + A PSN+ +G+ I E CCS+ Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAI-----KKSKAGSQAALERKPSNVVQMKGRPI----QQEQQKSSRCCST 208
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.966e-46 Identity = 91/192 (47.40%), Postives = 133/192 (69.27%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKK---SLSSGEPAPSNIKEGQT 705 YDYLFK++LIGDSGVGK+ LL RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +HA S++ M++GNK D+ R V+ E + A G+ F+ETSA + NVE+AF T+ +I +++K S SSG P I E ++ Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKITESRS 196
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.966e-46 Identity = 91/192 (47.40%), Postives = 133/192 (69.27%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKK---SLSSGEPAPSNIKEGQT 705 YDYLFK++LIGDSGVGK+ LL RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +HA S++ M++GNK D+ R V+ E + A G+ F+ETSA + NVE+AF T+ +I +++K S SSG P I E ++ Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKITESRS 196
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.353e-46 Identity = 94/205 (45.85%), Postives = 135/205 (65.85%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 753 YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F RT+++EG+ IK QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W++ + HA ++ M+IGNK D+ + V + +S A+ G+ F+ETSA +INVE+AF ++ + I K+ + + P ++ G + GA+ N KK CC Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKD----IKKRMIDTPNEQPQVVQPGTNL---GANN-NKKKACC 208
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.353e-46 Identity = 91/171 (53.22%), Postives = 122/171 (71.35%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISK 651 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++G+ IK QIWDTAGQE +R+IT +YYRGA GALLVYD+T+ TF +++ WL++ R H+ SN+VIM+IGNK+DL+ R V E+ +++A GL F+ETSA A NVE+A+ EIYR I + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQ 173
BLAST of FC929776 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.353e-46 Identity = 97/201 (48.26%), Postives = 131/201 (65.17%), Query Frame = 1 Query: 139 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTK 741 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++G+ IK QIWDTAGQE +R+IT +YYRGA GALLVYD+T+ TF +++ WL++ R H++SN+VIM+IGNK+DL+ R V E+ +++A GL F+ETSA A NVE+AF EIY I + A + IK G A+ A + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA-NGIKIGPQHAATNATHAGNQ 202 The following BLAST results are available for this feature:
BLAST of FC929776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929776 ID=FC929776; Name=FC929776; organism=Citrus clementina; type=EST; length=783bpback to top |