FC929797

Overview
NameFC929797
Unique NameFC929797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.917e-41
Identity = 82/141 (58.16%), Postives = 99/141 (70.21%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            V+FD+++ G+PAGRI  +LF DV P+TA+NFRALCTGE+G G       YKGS FHRVIP FM Q            +SIYG  FADENF  KH+ PG+LSMANAGP TNGSQFF+ T    WLDG HVVFG+V + M++V
Sbjct:    3 VYFDISIDGKPAGRIEFQLFEDVVPKTAKNFRALCTGEQGFG-------YKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELV 136          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.504e-41
Identity = 84/144 (58.33%), Postives = 102/144 (70.83%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            P VFFD+++G  PAGRI MELF D+TP+TAENFR LCTGE  I  +  P  YK ++FHRVIP FM Q             SIYG+ F DENF  KHTGPG+LSMAN+GP TNG QFF+ TA  E+LDGKH VFG+V++G+  V+
Sbjct:   13 PIVFFDISIGDTPAGRIKMELFDDITPKTAENFRQLCTGEHRI--NSVPQGYKKATFHRVIPQFMVQGGDFVRGDGTGSFSIYGAQFEDENFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRVIDGLLTVR 154          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 7.285e-41
Identity = 86/149 (57.72%), Postives = 97/149 (65.10%), Query Frame = 3
Query:  342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            SK  NP VFFD+    +P GRI MELF+++ P+TAENFRALCTGEKG G       +K S FHRVIP F+CQ             SIYG  F DENF  KHTGPG+LSMAN G  TN SQFF+   K E LD KHVVFG V +GMD VK
Sbjct:  920 SKETNPVVFFDICADDEPLGRITMELFSNIVPKTAENFRALCTGEKGFG-------FKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFDVKHTGPGLLSMANRGQDTNNSQFFITLKKAERLDFKHVVFGFVKDGMDTVK 1061          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.515e-41
Identity = 84/142 (59.15%), Postives = 97/142 (68.31%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            KV+FD+  G +  GRIV+ L+ +V P+T ENFRAL TGEKG G       YK S FHRVI  FM Q            +SIYG  FADENF  +HTGPGILSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EGMDVV
Sbjct:   31 KVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVV 165          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.623e-40
Identity = 83/146 (56.85%), Postives = 97/146 (66.44%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            PK FFD+++GG+PAGRIV EL++DV P+TAENF  LC G  G  KS    PL YKGS FHRVI  FMCQ            ESIYG  F DENF  KH  P +LSMANAG  TNGSQ F+    T  LDGKHVVFG+V++G  +V+
Sbjct:    6 PKTFFDISIGGKPAGRIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLVR 151          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.120e-40
Identity = 83/146 (56.85%), Postives = 100/146 (68.49%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIG-KSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXX---ESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            V+FD++  G+P GR+V +L+ DV P+TA NFR+LCTG+KGI  KSGKPL YK S FHRVI  FMCQ               ESIYG  F DENF   H  P +LSMAN+GP TNGSQFF+ T  T  LDGKHVVFG+V+EG  +V+
Sbjct:    6 VYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVR 151          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.120e-40
Identity = 87/159 (54.72%), Postives = 104/159 (65.41%), Query Frame = 3
Query:  315 FVFFSPINQSKMPN--PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            F+F     ++K P    KV+FD+   GQP GRIVM L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG+ F DENF  +HT  G+LSMANAG  TNGSQFF+ TA T WLDGKHVVFG+V+EG D+V
Sbjct:   19 FLFMGQTVEAKGPKITSKVYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIV 170          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.120e-40
Identity = 86/145 (59.31%), Postives = 98/145 (67.59%), Query Frame = 3
Query:  354 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            NP VF ++T GG P G IV+ELFADVTPRTAENFR  CTGE    K G P  YK  +FHRVI  FM Q             SIYGS F DENF  KH GPG+LSMANAG  TNG QFF+  AKT++LD KHVVFG+V++GM  V+
Sbjct:   16 NPIVFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGE--YKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVR 158          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.722e-40
Identity = 84/143 (58.74%), Postives = 96/143 (67.13%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            KVFFD+ VG + AGR+V+ LF    P+T ENF AL TGEKG G       +KGS FHRVI  FM Q            +SIYG  F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGMDVV+
Sbjct:   36 KVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFG-------FKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVR 171          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.055e-40
Identity = 81/149 (54.36%), Postives = 97/149 (65.10%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            M  PK FFD+++GG+P GRIV EL+ D+ P+TAENF  LC G  G+ K+    PL YKGS FHRVI  FMCQ            ESIY   F DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVFG+V++G  +V+
Sbjct:    1 MTRPKTFFDISIGGKPQGRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVR 149          
The following BLAST results are available for this feature:
BLAST of FC929797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIA2_RHIOR1.917e-4158.16Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPIH_CRYNE2.504e-4158.33Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]
RBP2_BOVIN7.285e-4157.72E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos ta... [more]
PPIB_ORPSP9.515e-4159.15Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPID_KLULA1.623e-4056.85Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
PPID_CANAL2.120e-4056.85Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
PPIB_ARTBE2.120e-4054.72Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
CYP11_CAEEL2.120e-4059.31Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
PPIB_CHICK4.722e-4058.74Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPID_YEAST8.055e-4054.36Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929797 ID=FC929797; Name=FC929797; organism=Citrus clementina; type=EST; length=789bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGG
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