FC929797

Overview
NameFC929797
Unique NameFC929797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.865e-37
Identity = 79/140 (56.43%), Postives = 89/140 (63.57%), Query Frame = 3
Query:  366 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            +FD++  G+P GRIV EL+ DV PRT  NFR LC    G G       +K S FHRVIP FM Q            ESIYG  F DENF KKH   G+LSMANAGP TNGSQFF+   KT WLDGKHVVFG+V+EG D V
Sbjct:    5 YFDVSSNGKPLGRIVFELYDDVVPRTTNNFRQLCLNPPGKG-------FKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQKKHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQV 137          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.741e-37
Identity = 81/142 (57.04%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            KVFFD+ +G +  GRIV+ LF  V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVFG+V++GM VV
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVV 173          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.887e-37
Identity = 77/142 (54.23%), Postives = 95/142 (66.90%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            V+FD+  G +P GR+V+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG  F DENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVE 156          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.382e-37
Identity = 81/142 (57.04%), Postives = 92/142 (64.79%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            KVFFD+ +G +  GRIV+ LF +V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVFG+V++GM VV
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVV 173          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 6.382e-37
Identity = 80/143 (55.94%), Postives = 91/143 (63.64%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            KV+FDM +GG+P GRIV+ LF    P+TA NF  L    KG G       Y GS FHRVI  FM Q             SIYG  FADENF  KH G G LSMANAG  TNGSQFF+ T KT WLDG+HVVFG+++EGMDVV+
Sbjct:   30 KVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEG-------YPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVR 165          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.335e-37
Identity = 81/142 (57.04%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            KVFFD+ +G +  GRIV+ LF  V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVFG+V++GM VV
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVV 173          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.089e-36
Identity = 84/159 (52.83%), Postives = 95/159 (59.75%), Query Frame = 3
Query:  360 KVFFDMTVGGQ--------------PAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV--EGMDVVK 788
            KVFFD+   G                +GRI   L+ DV P+TA NF+ LCTG+ G G       YKGSSFHR+IP FM Q            +SIYG  FADENF KKH  PG+LSMANAGP TNGSQFFV T  T WLDG+HVVFG+V   E M VVK
Sbjct:   46 KVFFDLEWEGPVLGPNNKPTSEIKAQSGRINFTLYDDVVPKTARNFKELCTGQNGFG-------YKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEVADDESMKVVK 197          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.422e-36
Identity = 76/146 (52.05%), Postives = 99/146 (67.81%), Query Frame = 3
Query:  342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSX-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGM 776
            +++  P VFFD+++G  P GR+ MELF+D+ PRTAENFR LCTGE    ++G P  YK   FHRVI  FM Q              IYG   FADENF++KHTG G+LSMAN+GP +NG QFF+     ++LDGKHVVFG++V+G+
Sbjct:    6 NQVERPVVFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGL 149          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.422e-36
Identity = 79/143 (55.24%), Postives = 91/143 (63.64%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            KVFFD+ V  QP GRI++ LF    P+T ENF+ L  G     K G+   YKGS+FHRVI  FM Q             SIYG  F DENF  KH G G LSMANAGP TNG+QFF+ T +  WLDGKHVVFG+VVEGM VV+
Sbjct:   33 KVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVR 173          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.425e-36
Identity = 77/142 (54.23%), Postives = 90/142 (63.38%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 788
            VFFD+  GG    +IV +L+ DV P+TA NFR L TG +G G       YKGS FHRVI  FM Q            +SIYG  FADENF  KHT P +LSMANAGP TNGSQFF+      WLDGKHVVFG+VV+G D ++
Sbjct:    4 VFFDVQFGGDAPKKIVFKLYDDVVPKTAANFRELATGSRGFG-------YKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVVDGFDTLE 138          
The following BLAST results are available for this feature:
BLAST of FC929797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CYPH_UROFA2.865e-3756.43Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
PPIC_HUMAN3.741e-3757.04Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIB_ASPOR4.887e-3754.23Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIC_MOUSE6.382e-3757.04Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
CYP5_CAEEL6.382e-3755.94Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPIC_BOVIN8.335e-3757.04Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
CYPH_NEUCR1.089e-3652.83Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIH_RHIOR1.422e-3652.05Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIB_SCHJA1.422e-3655.24Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIA_PARPR2.425e-3654.23Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929797 ID=FC929797; Name=FC929797; organism=Citrus clementina; type=EST; length=789bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGG
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