FC929797

Overview
NameFC929797
Unique NameFC929797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18
Identity = 54/130 (41.54%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G  F DE +   KH   G++SMAN GP TNGSQFF+   K   LD K+ VFG+V++G++ +
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETL 128          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18
Identity = 54/130 (41.54%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G  F DE +   KH   G++SMAN GP TNGSQFF+   K   LD K+ VFG+V++G++ +
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCIFHRNIKGFMVQTGDPTGTGRGG-NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETL 128          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.080e-18
Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            G + +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG G+LSMAN+GP TN SQFF+      +LD KH +FG+VV G D +
Sbjct:  289 GDLNLELHCDLTPKTCENFIKLC----------KKQYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTL 407          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.635e-18
Identity = 55/130 (42.31%), Postives = 70/130 (53.85%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            G + +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG GILSMAN+GP +N SQFF+      +LD KH +FG+VV G DV+
Sbjct:  289 GDLNLELHCDLTPKTCENFIRLC----------KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVL 407          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.132e-17
Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+   F DE +   KH   G++SMAN GP TNGSQFF+   K   LD K+ VFG+V++G++ +
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETL 128          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.931e-17
Identity = 56/128 (43.75%), Postives = 69/128 (53.91%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXX----ESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV 767
            G I +E++ +  P+TAENF ALC    G G      +Y  S FHRVIP FM Q                 SI+G  F DE     +H   G+LSMAN GPGTNGSQFF+   K   LDG + VFG+V+
Sbjct:   10 GDIKVEIYCESVPKTAENFLALC----GSG------YYDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVI 127          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIL3_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neurospora crassa GN=cyp-10 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.521e-17
Identity = 55/128 (42.97%), Postives = 69/128 (53.91%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXX----ESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV 767
            G + +E+F +  P+TAENF ALC        SG   +Y  S FHR+IP FM Q                 SIYG  F DE   V +H   GI+SMAN GP TNGSQFF+   K   LDG + VFG+++
Sbjct:   10 GDLKIEIFCESVPKTAENFLALCA-------SG---YYNASPFHRMIPSFMVQTGAPANPSPPENPKGGRSIYGPTFEDEIRPVLRHNERGIVSMANKGPNTNGSQFFILFDKAPHLDGLNTVFGKLI 127          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.521e-17
Identity = 56/127 (44.09%), Postives = 69/127 (54.33%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGM 776
            G + +EL  D+ PR  ENF  LC  E+G        +Y G +FHR I  FM Q            ESI+G  F DE N    H+G G++SMAN+GP TNGSQFFV       L+ KH VFG VV G+
Sbjct:  353 GDLNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGL 468          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.301e-17
Identity = 43/102 (42.16%), Postives = 53/102 (51.96%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSM 668
            V+ D+ +   P GR++ EL+ D  PRT  NF+ LCTG  G  + G  LHYK S FHRV+     Q            ESIYG  F DENF   H   G+L M
Sbjct:  146 VYLDICIDLSPIGRLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          
BLAST of FC929797 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.617e-17
Identity = 57/132 (43.18%), Postives = 70/132 (53.03%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK---KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVV 785
            G + +EL  D  P+T  NF  L        K+GK   Y    FHR+IPGFM Q            ES +G  F DE+  K   KH   G+LSMAN+GP TNGSQFF     T  LDGKH VFG++V G + +
Sbjct:  323 GPLNVELHGDRAPKTVYNFVQLA-------KAGK---YDNVVFHRLIPGFMVQGGDPTGTGRGG-ESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETL 443          
The following BLAST results are available for this feature:
BLAST of FC929797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIL3_RAT2.280e-1841.54Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_HUMAN2.280e-1841.54Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL2_MOUSE5.080e-1841.54Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_HUMAN6.635e-1842.31Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL3_MOUSE1.132e-1740.77Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIL3_GIBZE1.931e-1743.75Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
PPIL3_NEUCR2.521e-1742.97Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neur... [more]
PPIL2_ARATH2.521e-1744.09Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
PPIL6_MOUSE4.301e-1742.16Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]
PPIL2_CRYNE5.617e-1743.18Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH3AD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929797 ID=FC929797; Name=FC929797; organism=Citrus clementina; type=EST; length=789bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGG
back to top