FC929809

Overview
NameFC929809
Unique NameFC929809
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC929809_ssr137 microsatellite FC929809_ssr137:137..148. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig9267 contig Ccv1_Contig9267:2..837. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929809 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.617e-15
Identity = 48/113 (42.48%), Postives = 66/113 (58.41%), Query Frame = -2
Query:  448 NELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 783
            N L +    G  +  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N+       W+FWVGP +GA VAA  + Y+L
Sbjct:  120 NSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAAVAAILYFYLL 225          
BLAST of FC929809 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.464e-15
Identity = 51/122 (41.80%), Postives = 69/122 (56.56%), Query Frame = -2
Query:  448 YYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 810
            Y  R     N L +    G  + AE+I TF L   VFS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AVI ++  +    W+FWVGP +GA  AA  + Y+L
Sbjct:  111 YNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAIIYFYLL 225          
BLAST of FC929809 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.614e-15
Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = -2
Query:  448 NELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 783
            N L +   +G  +  E+I TF L   +F++TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N+       W+FWVGP +GA +AA  + Y+L
Sbjct:  120 NALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PAHWVFWVGPIVGAVLAAILYFYLL 225          
BLAST of FC929809 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.944e-15
Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = -2
Query:  451 GANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 789
            GA  L+ G      +  EI+ TF LVYTV++ A DPK+      + V+AP+ IGF V    LA     G  +NPA SFG AV+      WD+ W++W+GPF+GA +AA  +  I
Sbjct:  131 GAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of FC929809 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.944e-15
Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = -2
Query:  472 NELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVA 783
            N L  G ++  GL  E+ GT VL  TV      KR         +A LPIG ++FM H+A    TGTG+NPARS GAAV       +   WI+W+GP +GAF+A
Sbjct:  165 NALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLA 261          
BLAST of FC929809 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 80.4925 bits (197), Expect = 1.299e-14
Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = -2
Query:  445 GGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILR 795
            G G   +A G + G G+  E + TF+LV+ V    D +R+     V   APL IG ++   HLA I  TG  +NPARSFG AV+      + D W++WVGP +G  VA   ++   +
Sbjct:  128 GLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRT----DVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVYWVGPIVGGIVAGAVYRLFFK 237          
BLAST of FC929809 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.299e-14
Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = -2
Query:  445 GGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILR 795
            G G   +      G G+  E + TF+LV+ V    D +RS     +   APL IG ++   HL+ I  TG  +NPARSFG AV+      W DQW++WVGP +G  +A   ++   +
Sbjct:  129 GLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRS----DIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGAVYRLFFK 238          
BLAST of FC929809 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.299e-14
Identity = 42/112 (37.50%), Postives = 61/112 (54.46%), Query Frame = -2
Query:  448 NELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 783
            N L +    G  +  E+  T  LV  +F +TD +R  +  H      L IGF+V + HL  I  TG  +NPARS   A++  K   +DD W+FW+GP +GA VA+  + Y+L
Sbjct:  119 NALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of FC929809 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.893e-14
Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = -2
Query:  448 NELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 783
            N L++    G  +  E+  T  LV  +F++TD +R       P    L IGF+V + HL  I  TG  +NPARS   AV+  K   +DD W+FW+GP +GA + +  + Y+L
Sbjct:  119 NALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAILGSLLYNYVL 223          
BLAST of FC929809 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.935e-14
Identity = 43/112 (38.39%), Postives = 60/112 (53.57%), Query Frame = -2
Query:  442 LADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRA 777
            LA G     G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARSFG AV  N +  W + W++W GP +G  VA   ++ + RA
Sbjct:  138 LAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
The following BLAST results are available for this feature:
BLAST of FC929809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
AQP5_PIG2.617e-1542.48Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP5_SHEEP4.464e-1541.80Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_HUMAN7.614e-1540.71Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP12_ORYSJ9.944e-1541.23Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQY2_YEAST9.944e-1543.27Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQP_ANOGA1.299e-1437.61Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP_AEDAE1.299e-1435.90Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP2_SHEEP1.299e-1437.50Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP2_HUMAN2.893e-1436.61Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP_CICVR4.935e-1438.39Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929809 ID=FC929809; Name=FC929809; organism=Citrus clementina; type=EST; length=835bp
TTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTAA
TTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAGG
ATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACTT
ATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCCT
TACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTAC
AATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAGC
TTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGAT
CATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGCT
TAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGAG
AATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCAA
CCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCACA
GCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGAT
GGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGAGTGGTGCCA
AGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCAGAG
AAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGTCC
GGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCATACC
TGTTGTAGTATGATTTTTGGAAAGCTTTCACAACC
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