FC929814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929814 vs. ExPASy Swiss-Prot
Match: PSB8_MOUSE (Proteasome subunit beta type-8 OS=Mus musculus GN=Psmb8 PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 9.610e-52 Identity = 98/175 (56.00%), Postives = 124/175 (70.86%), Query Frame = 3 Query: 3 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 527 YISS + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D+S I +AT RD SGGV ++Y++ +GW K+ DV +L Y Y Sbjct: 97 YISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKY 271
BLAST of FC929814 vs. ExPASy Swiss-Prot
Match: PSB5_SCHPO (Proteasome subunit beta type-5 OS=Schizosaccharomyces pombe GN=pts1 PE=2 SV=3) HSP 1 Score: 203.756 bits (517), Expect = 9.610e-52 Identity = 100/170 (58.82%), Postives = 125/170 (73.53%), Query Frame = 3 Query: 6 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 515 I+SQ+VKK+IEINPY+LGT+AGGAADCQFW LG++CRLH+L NK ISV+ ASK+L+NI YSY+G GLS+GTM+AG + G LYY+DS+G RLKG FSVGSGS +AYGVLDSGY++D+S I AT RDA SGG ++Y++ NGW DV L Sbjct: 87 IASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSDGTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDAYSGGSVNLYHIDENGWVFHGNFDVDSL 256
BLAST of FC929814 vs. ExPASy Swiss-Prot
Match: PSB8_BOVIN (Proteasome subunit beta type-8 OS=Bos taurus GN=PSMB8 PE=1 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 1.639e-51 Identity = 96/175 (54.86%), Postives = 125/175 (71.43%), Query Frame = 3 Query: 3 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 527 YI++ V K+IEINPY+LGTM+G AADC +W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ +AYGV+DSGY+ D+SI I HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y Sbjct: 97 YIATLKVNKVIEINPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQY 271
BLAST of FC929814 vs. ExPASy Swiss-Prot
Match: PSB8_RAT (Proteasome subunit beta type-8 OS=Rattus norvegicus GN=Psmb8 PE=1 SV=3) HSP 1 Score: 202.216 bits (513), Expect = 2.796e-51 Identity = 97/179 (54.19%), Postives = 126/179 (70.39%), Query Frame = 3 Query: 3 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 539 YI++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D+S I +AT RD+ SGGV ++Y++ +GW K+ DV +L + Y T Sbjct: 97 YIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMYHMKKDGWVKVESTDVSDLLHKYREAT 275
BLAST of FC929814 vs. ExPASy Swiss-Prot
Match: PSB8_HUMAN (Proteasome subunit beta type-8 OS=Homo sapiens GN=PSMB8 PE=1 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 8.135e-51 Identity = 96/175 (54.86%), Postives = 125/175 (71.43%), Query Frame = 3 Query: 3 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 527 YIS+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S I +AT RD+ SGGV ++Y++ +GW K+ DV +L + Y Sbjct: 97 YISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
BLAST of FC929814 vs. ExPASy Swiss-Prot
Match: PSB8_CANFA (Proteasome subunit beta type-8 OS=Canis familiaris GN=PSMB8 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.062e-50 Identity = 97/175 (55.43%), Postives = 123/175 (70.29%), Query Frame = 3 Query: 3 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 527 YISS V K+IEINP +LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++Y YRGM LS+G+MI GWD+ GPGLYYVD G RL G FS GSGS YAYGV+DSGY+ +S I +AT RD+ SGG+ ++Y++ +GW K+ DV EL + Y Sbjct: 97 YISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDKKGPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSGGIINMYHMKEDGWVKVESTDVNELLHQY 271
BLAST of FC929814 vs. ExPASy Swiss-Prot
Match: PSB5_YEAST (Proteasome component PRE2 OS=Saccharomyces cerevisiae GN=PRE2 PE=1 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 1.812e-50 Identity = 98/174 (56.32%), Postives = 125/174 (71.84%), Query Frame = 3 Query: 3 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 521 +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV ASK+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLDS YK+D+S+ I A RDA SGG ++Y+V +GW DVGEL + Sbjct: 100 WVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFW 273
BLAST of FC929814 vs. ExPASy Swiss-Prot
Match: PSB11_HUMAN (Proteasome subunit beta type-11 OS=Homo sapiens GN=PSMB11 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.298e-37 Identity = 77/172 (44.77%), Postives = 110/172 (63.95%), Query Frame = 3 Query: 3 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 518 Y++ + K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++ YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DMS + HAT RDA SGG +++V +GW+ +S D L+ Sbjct: 74 YVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLY 245
BLAST of FC929814 vs. ExPASy Swiss-Prot
Match: PSB11_MOUSE (Proteasome subunit beta type-11 OS=Mus musculus GN=Psmb11 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.119e-37 Identity = 77/172 (44.77%), Postives = 109/172 (63.37%), Query Frame = 3 Query: 3 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 518 Y++ + +K+I ++ +LGT +G +ADC W+R L + RL EL + SV G +KLLA ++ YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD GY +DM+I + HAT RDA SGG +++V +GW+ +S D L+ Sbjct: 74 YVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMSCYRGLDLCVATALCGWDHSGPALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDACVLY 245
BLAST of FC929814 vs. ExPASy Swiss-Prot
Match: PSB8_PIG (Proteasome subunit beta type-8 (Fragment) OS=Sus scrofa GN=PSMB8 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.008e-29 Identity = 61/104 (58.65%), Postives = 75/104 (72.12%), Query Frame = 3 Query: 120 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRD 431 RL+ L N RISV+ ASKL +N++Y YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSG+++D+SI I HAT RD Sbjct: 1 RLYYLRNGARISVSAASKLXSNMMYQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 104 The following BLAST results are available for this feature:
BLAST of FC929814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929814 ID=FC929814; Name=FC929814; organism=Citrus clementina; type=EST; length=809bpback to top |