FC929817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_SHIB3 (Glycogen synthase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_SERP5 (Glycogen synthase OS=Serratia proteamaculans (strain 568) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKW 317 AD I++PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G DC+AV A+ +RRA+ + + + ++ M+ D W+ A+++ Sbjct: 367 ADVIMVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVVDCALENLADGSASGFVFDDCDAV------ALGNAIRRAMVLWSRPKHWRHVQRHAMSVDFGWQVAAQEY 469
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_LACLA (Glycogen synthase OS=Lactococcus lactis subsp. lactis GN=glgA PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEE 323 +DF L+PS FEPCGL Q+ AMRYGT+PIV GGL DTV +EG TGF VD E V+ T+ RAL YG + L +M+ + M++D SW A+++ E Sbjct: 371 SDFFLMPSAFEPCGLSQMIAMRYGTLPIVHEIGGLKDTVIPFNPISKEG-TGFGF----VDFEGQILVE------TINRALEVYGKEPEVLNKMVLSAMSKDFSWGTKAQQYIE 473
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_FRATW (Glycogen synthase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 338 +D I++PSRFEPCGL QL+ + YGT+P+V GGL DTV + TGF FSV+ +++ +RRA A Y + ++ K M Q ++W A+K + NL Sbjct: 375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_FRATT (Glycogen synthase OS=Francisella tularensis subsp. tularensis GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 338 +D I++PSRFEPCGL QL+ + YGT+P+V GGL DTV + TGF FSV+ +++ +RRA A Y + ++ K M Q ++W A+K + NL Sbjct: 375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_FRATO (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 344 +D I++PSRFEPCGL QL+ + YGT+P+V GGL DT+ + TGF FSV+ +++ +RRA A Y + ++ K M Q ++W A+K + NL + Sbjct: 375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTIIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNLVI 486
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_FRATM (Glycogen synthase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 338 +D I++PSRFEPCGL QL+ + YGT+P+V GGL DTV + TGF FSV+ +++ +RRA A Y + ++ K M Q ++W A+K + NL Sbjct: 375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLVIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_FRATH (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 344 +D I++PSRFEPCGL QL+ + YGT+P+V GGL DT+ + TGF FSV+ +++ +RRA A Y + ++ K M Q ++W A+K + NL + Sbjct: 375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTIIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNLVI 486
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_FRATF (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 344 +D I++PSRFEPCGL QL+ + YGT+P+V GGL DT+ + TGF FSV+ +++ +RRA A Y + ++ K M Q ++W A+K + NL + Sbjct: 375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTIIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNLVI 486
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_FRAT1 (Glycogen synthase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 338 +D I++PSRFEPCGL QL+ + YGT+P+V GGL DTV + TGF FSV+ +++ +RRA A Y + ++ K M Q ++W A+K + NL Sbjct: 375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484 The following BLAST results are available for this feature:
BLAST of FC929817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929817 ID=FC929817; Name=FC929817; organism=Citrus clementina; type=EST; length=707bpback to top |