FC929819

Overview
NameFC929819
Unique NameFC929819
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929819 vs. ExPASy Swiss-Prot
Match: NUOB_RICPU (NADH-quinone oxidoreductase subunit B OS=Rickettsia peacockii (strain Rustic) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.183e-56
Identity = 98/148 (66.22%), Postives = 120/148 (81.08%), Query Frame = 1 
Query:  316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYY 759
            F+++K+DDV+ + R  S+WPM+FGLACCAVEMM   A+RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPALRKVYDQM +P+WV+SMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YG++QLQKK+ R     Y
Sbjct:   21 FLLTKVDDVIGWARANSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMAEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQKKIKRTTGFKY 168
[Close]
BLAST of FC929819 vs. ExPASy Swiss-Prot
Match: NUOB_RICPR (NADH-quinone oxidoreductase subunit B OS=Rickettsia prowazekii GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.183e-56
Identity = 98/148 (66.22%), Postives = 121/148 (81.76%), Query Frame = 1 
Query:  316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYY 759
            F++SK+D+V+++ R  S+WPM+FGLACCAVEMM   A+RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPALRKVYDQM +P+WV+SMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YG++QLQKK+ R     Y
Sbjct:   21 FLLSKVDEVISWARANSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMTEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQKKIKRTTGFKY 168
[Close]
BLAST of FC929819 vs. ExPASy Swiss-Prot
Match: NUOB_RICFE (NADH-quinone oxidoreductase subunit B OS=Rickettsia felis GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.183e-56
Identity = 98/148 (66.22%), Postives = 120/148 (81.08%), Query Frame = 1 
Query:  316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYY 759
            F+++K+DDV+ + R  S+WPM+FGLACCAVEMM   A+RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPALRKVYDQM +P+WV+SMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YG++QLQKK+ R     Y
Sbjct:   21 FLLTKVDDVIGWARANSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMAEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQKKIKRTTGFKY 168
[Close]
BLAST of FC929819 vs. ExPASy Swiss-Prot
Match: NUOB_RICCN (NADH-quinone oxidoreductase subunit B OS=Rickettsia conorii GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.183e-56
Identity = 98/148 (66.22%), Postives = 120/148 (81.08%), Query Frame = 1 
Query:  316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYY 759
            F+++K+DDV+ + R  S+WPM+FGLACCAVEMM   A+RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPALRKVYDQM +P+WV+SMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YG++QLQKK+ R     Y
Sbjct:   21 FLLTKVDDVIGWARANSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMAEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQKKIKRTTGFKY 168
[Close]
BLAST of FC929819 vs. ExPASy Swiss-Prot
Match: NUOB_RICCK (NADH-quinone oxidoreductase subunit B OS=Rickettsia canadensis (strain McKiel) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.183e-56
Identity = 98/148 (66.22%), Postives = 120/148 (81.08%), Query Frame = 1 
Query:  316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYY 759
            F+++K+DDV+ + R  S+WPM+FGLACCAVEMM   A+RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPALRKVYDQM +P+WV+SMGSCAN              CDRIVPVDIY+PGCPPTAEAL+YG++QLQKK+ R     Y
Sbjct:   21 FLLTKVDDVIGWARANSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMAEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDIYIPGCPPTAEALIYGLMQLQKKIKRTTGFKY 168
[Close]
BLAST of FC929819 vs. ExPASy Swiss-Prot
Match: NUOB_RICB8 (NADH-quinone oxidoreductase subunit B OS=Rickettsia bellii (strain OSU 85-389) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.183e-56
Identity = 98/148 (66.22%), Postives = 120/148 (81.08%), Query Frame = 1 
Query:  316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYY 759
            F+++K+DDV+ + R  S+WPM+FGLACCAVEMM   A+RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPALRKVYDQM +P+WV+SMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YG++QLQKK+ R     Y
Sbjct:   21 FLLTKVDDVIGWARSNSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMAEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQKKIKRTTGFKY 168
[Close]
BLAST of FC929819 vs. ExPASy Swiss-Prot
Match: NUOB_RICAE (NADH-quinone oxidoreductase subunit B OS=Rickettsia africae (strain ESF-5) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.183e-56
Identity = 98/148 (66.22%), Postives = 120/148 (81.08%), Query Frame = 1 
Query:  316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYY 759
            F+++K+DDV+ + R  S+WPM+FGLACCAVEMM   A+RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPALRKVYDQM +P+WV+SMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YG++QLQKK+ R     Y
Sbjct:   21 FLLTKVDDVIGWARANSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMTEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQKKIKRTTGFKY 168
[Close]
BLAST of FC929819 vs. ExPASy Swiss-Prot
Match: NUOB_METPP (NADH-quinone oxidoreductase subunit B OS=Methylibium petroleiphilum (strain PM1) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.183e-56
Identity = 99/146 (67.81%), Postives = 118/146 (80.82%), Query Frame = 1 
Query:  316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 753
            F+ +  D ++N+ + GS+WPM+FGLACCAVEMMH GAARYD+DRFG++FRPSPRQSD+M+VAGTL NKMAPALR+VYDQM +PRWV+SMGSCAN              CDRIVPVD+YVPGCPPTAEALLYGILQLQ K+ R   +
Sbjct:   11 FITTSADKLINWSKTGSLWPMTFGLACCAVEMMHAGAARYDIDRFGMLFRPSPRQSDLMIVAGTLCNKMAPALRRVYDQMAEPRWVLSMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGILQLQAKIRRENTI 156
[Close]
BLAST of FC929819 vs. ExPASy Swiss-Prot
Match: NUOB_HALHL (NADH-quinone oxidoreductase subunit B OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.183e-56
Identity = 102/142 (71.83%), Postives = 115/142 (80.99%), Query Frame = 1 
Query:  316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 741
            +V +  D ++N+ R GS+WPM+FGLACCAVEMMHT A RYD+DR G+IFRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+P+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL YGILQLQ K+ R
Sbjct:   11 YVTTSADKLINWARTGSLWPMTFGLACCAVEMMHTAAGRYDMDRNGLIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPKWVISMGSCANGGGYYHYSYSVTRGCDRIVPVDIYVPGCPPTAEALYYGILQLQNKIRR 152
[Close]
BLAST of FC929819 vs. ExPASy Swiss-Prot
Match: NUOB_GRABC (NADH-quinone oxidoreductase subunit B OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.545e-56
Identity = 102/142 (71.83%), Postives = 117/142 (82.39%), Query Frame = 1 
Query:  316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 741
            FV++ LD +VN+ R GS+WPM+FGLACCAVEM+H    RYDLDRFG+I R SPRQSDVM+VAGTLTNKMAPALR+VYDQMP+PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YGI+QLQKK+ R
Sbjct:   46 FVVANLDKLVNWARTGSLWPMTFGLACCAVEMIHAYMPRYDLDRFGVIPRASPRQSDVMIVAGTLTNKMAPALRRVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGIMQLQKKIRR 187
The following BLAST results are available for this feature:
BLAST of FC929819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOB_RICPU1.183e-5666.22NADH-quinone oxidoreductase subunit B OS=Rickettsi... [more]
NUOB_RICPR1.183e-5666.22NADH-quinone oxidoreductase subunit B OS=Rickettsi... [more]
NUOB_RICFE1.183e-5666.22NADH-quinone oxidoreductase subunit B OS=Rickettsi... [more]
NUOB_RICCN1.183e-5666.22NADH-quinone oxidoreductase subunit B OS=Rickettsi... [more]
NUOB_RICCK1.183e-5666.22NADH-quinone oxidoreductase subunit B OS=Rickettsi... [more]
NUOB_RICB81.183e-5666.22NADH-quinone oxidoreductase subunit B OS=Rickettsi... [more]
NUOB_RICAE1.183e-5666.22NADH-quinone oxidoreductase subunit B OS=Rickettsi... [more]
NUOB_METPP1.183e-5667.81NADH-quinone oxidoreductase subunit B OS=Methylibi... [more]
NUOB_HALHL1.183e-5671.83NADH-quinone oxidoreductase subunit B OS=Halorhodo... [more]
NUOB_GRABC1.545e-5671.83NADH-quinone oxidoreductase subunit B OS=Granuliba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AF02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AF02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929819 ID=FC929819; Name=FC929819; organism=Citrus clementina; type=EST; length=762bp
AACAACAATCAATTTCTCTCTCGCTTTGCCCCCGTGTGAGAAAACTAAAC
CAAACCAAACCAAACCCCACCCCACAACCCCCAAAACACAAGCCCAAAAA
AAAAAAAAAAAAAAACTATGGCGGTACTCACCAAAAACACTGCCACGCGC
CTCCCTCTCCTCCTCTCGCAACGCGCCGCCTGTCTCCACACGACCGTCCC
CTCTCTCTCCTCGGCCTCCGGCTCCTCCTCCTCCTTCTCCTCGCAGCCCA
CCTCCTACGCTCGCCCTCCACCGCCCTCGACCACAAGTCCAGGCGGTATC
TCAAAGACGGCGGAATTCGTGATCTCTAAATTGGATGATGTCGTCAACTA
TATTCGTCGCGGCTCCATCTGGCCCATGTCCTTCGGGCTGGCCTGCTGCG
CCGTCGAGATGATGCACACCGGTGCTGCTCGTTACGATTTAGATCGATTC
GGTATCATTTTCAGGCCCAGCCCTCGCCAATCCGATGTCATGGTCGTAGC
TGGCACACTCACAAACAAGATGGCCCCTGCCCTTCGCAAGGTTTATGATC
AAATGCCAGATCCTAGGTGGGTCATTTCTATGGGAAGCTGTGCAAATGGT
GGTGGATATTATCATTACTCTTACTCTGTTGTTCGGGGTTGCGATAGGAT
TGTCCCCGTGGACATCTATGTTCCGGGCTGCCCTCCTACTGCTGAGGCCC
TACTCTATGGAATTCTCCAACTGCAGAAAAAGATGAACAGGCGCAGAGAT
TTGTATTATTGG
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