FC929820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929820 vs. ExPASy Swiss-Prot
Match: EI2BG_RAT (Translation initiation factor eIF-2B subunit gamma OS=Rattus norvegicus GN=Eif2b3 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.749e-12 Identity = 64/235 (27.23%), Postives = 106/235 (45.11%), Query Frame = 1 Query: 154 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDE-----PSKYGVVVTEE--------STGKVEKFV------------------EKPKL-FVGNKINAGIYLLNPAVLDRI--ELRPTSIEKEVFPKL 756 +A+++ G G+R+ LT S+PKPL+ NKP+I + + L+ VG EV++ +V EF+ KL I+C + +GTA L KL D VL D+I++ E+++ +A+ ++++ K E P + G T E STGK F+ + P++ F ++A +Y L V+D + TSI E+ P L Sbjct: 4 QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTT--KDVQKALCAEFKMKLKPDIVCIPDEADMGTADSLRHIYPKLKTDV----LVLGCDLITDVALHEVVDLFRAYDASLAMLMRKGQESTEPVPGQKGKKKTVEQRDFIGVDSTGKRLLFMANEADLDEELVIKGSILQKHPRIHFQTGLVDAHLYCLKKYVVDFLMENKSITSIRSELIPYL 232
BLAST of FC929820 vs. ExPASy Swiss-Prot
Match: RMLA_SALAN (Glucose-1-phosphate thymidylyltransferase OS=Salmonella anatum GN=rmlA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.143e-11 Identity = 49/195 (25.13%), Postives = 94/195 (48.21%), Query Frame = 1 Query: 148 TMKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIE-LRPTS 729 T K +IL GG GTRL P+T++V K L+ +KPMI + + L G+ ++++ Q L ++ G+ + + P G A + + + +D + VL ++ + +++E A++ V++P +YGVV ++S G EKP N G+Y + +V++ + L+P++ Sbjct: 3 TRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGND--DCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDQS-GTAVSLEEKPLQPKSNYAVTGLYFYDNSVVEMAKNLKPSA 194
BLAST of FC929820 vs. ExPASy Swiss-Prot
Match: GLMU_PELPD (Bifunctional protein glmU OS=Pelobacter propionicus (strain DSM 2379) GN=glmU PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.143e-11 Identity = 51/187 (27.27%), Postives = 94/187 (50.27%), Query Frame = 1 Query: 157 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVL-NSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEK----PKLFVGNKINAGIYLLNPAVL 702 A+IL G GTR++ + V P+ A +PMI +EA + G VVL + +Q E + + F+ I C+ + E LGT +A A L +G + ++ ++ +++ FH++ G +++ +++ P YG V+ +E+ G+V + VE+ P+ +IN+GIY + L Sbjct: 6 AIILAAGKGTRMKSGLVKVLHPI---AGRPMIDWPLEAARGAGAAPVVLVVGHQAEAV---RERFQG--AGDIACALQAEQLGTGHAVACAAPALAGFSGTVLILCGDTPLLRGGTLTDLLAFHRSQGAAVTVLTARMENPHGYGRVLRDEA-GRVLRIVEQKDASPQECSVREINSGIYCMEAGFL 183
BLAST of FC929820 vs. ExPASy Swiss-Prot
Match: GLMU_DESRM (Bifunctional protein glmU OS=Desulfotomaculum reducens (strain MI-1) GN=glmU PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.143e-11 Identity = 53/206 (25.73%), Postives = 103/206 (50.00%), Query Frame = 1 Query: 151 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVL-NSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEK----PKLFVGNKINAGIYLLN-PAVLDRI-ELRPTSIEKEVF 747 + A+IL G GTR++ ++PK L + +PM+ H + ++ A GV + V+ + E + +F +G K + E LGTA L A +L D G V ++ ++ A++ ++H G A+++ ++ +P+ YG V+ + G V VE+ P+ ++IN G+Y P + + + E+ P +++ E + Sbjct: 3 LAAVILAAGKGTRMKS---NLPKVLHQLCGRPMLSHVLNSVVAAGVDKTVVVAGFGAEQVTDF-------VGEKARVVLQREQLGTAHALLQAEGELTDYPGHLLVVCGDTPLLRAETLAKLADYHCESGAVATLLTAEMADPTGYGRVI-RTTEGNVSHIVEQKDASPEELNVHEINTGVYCFKVPGLFNALKEISPANVQGEYY 197
BLAST of FC929820 vs. ExPASy Swiss-Prot
Match: RMLA_STRMU (Glucose-1-phosphate thymidylyltransferase OS=Streptococcus mutans GN=rmlA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.545e-11 Identity = 46/185 (24.86%), Postives = 88/185 (47.57%), Query Frame = 1 Query: 151 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD 705 MK +IL GG GTRL PLT + K L+ +KPMI + + L G+ ++++ Q L + ++ GIK+ +++ P G A + + + DD +L ++ + M++ + A++ +V +P ++GVV + + EKP+ + G+Y + +V+D Sbjct: 1 MKGIILAGGSGTRLYPLTRAASKQLMPVYDKPMIYYPLSTLMLAGIKDILIISTPQDLPRFKELLQDGSEFGIKLSYAEQPSPDGLAQAFIIGEEFIGDD--HVALILGDNIYYGPGLSRMLQKAASKESGATVFGYQVKDPERFGVVEFDNDRNAI-SIEEKPEHPKSHYAVTGLYFYDNSVVD 182
BLAST of FC929820 vs. ExPASy Swiss-Prot
Match: GLGC_BACCN (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=glgC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.545e-11 Identity = 58/196 (29.59%), Postives = 94/196 (47.96%), Query Frame = 1 Query: 157 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKII-----CSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL 702 A++L GG G+RL LT ++ KP V F K I+ + G+ V + YQP + N++ A G+ ++ S GTA + + L E +L+ D I + +++M+++H A + SI V +V DE S++G++ T E VE F EKP+ N + GIY+ N A+L Sbjct: 9 AMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCSNSGIETVGILTQYQPLELHNYIGIGNAWDLDRVNGGVTVLPPYAEASGVKWYTGTASAIYQNMNFLRQYNPEYVLILSGDHIYKMDYSKMLDYHIAKEADVSISVIEVPWDEASRFGIMNTNEEMEIVE-FEEKPQFPKSNLASMGIYIFNWAIL 203
BLAST of FC929820 vs. ExPASy Swiss-Prot
Match: EI2BG_HUMAN (Translation initiation factor eIF-2B subunit gamma OS=Homo sapiens GN=EIF2B3 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.545e-11 Identity = 40/137 (29.20%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 154 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTK 564 +A+++ G G+R+ LT S+PKPL+ NKP+I + + L+ VG EV++ +V EF+ K+ I+C + +GTA L KL D VL+ D+I++ E+++ +A+ ++++ K Sbjct: 4 QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTT--RDVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTDV----LVLSCDLITDVALHEVVDLFRAYDASLAMLMRK 134
BLAST of FC929820 vs. ExPASy Swiss-Prot
Match: RMLA_XANCP (Glucose-1-phosphate thymidylyltransferase OS=Xanthomonas campestris pv. campestris GN=rmlA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11 Identity = 50/185 (27.03%), Postives = 85/185 (45.95%), Query Frame = 1 Query: 154 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEP-FFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD 705 K +IL GG GTRL P+T V K L+ +KPMI + + L G+ ++++ + + L A+ G+ I + + P G A + RD + G+P VL ++ + + + A A++ V++P +YGV ++ GKV EKP+ N G+Y + D Sbjct: 5 KGIILAGGSGTRLYPITKGVSKQLLPVYDKPMIYYPLSVLMLAGIRDILIINTPHEQALFQSLLGDGAQWGVNIQYAVQPSPDGLAQAYLIGRDFV---GGKPSCLVLGDNIFHGHGLTDTLRRADAREQGATVFGYWVNDPERYGVAEFDQH-GKVIDIAEKPEKPRSNYAVTGLYFYDGKASD 185
BLAST of FC929820 vs. ExPASy Swiss-Prot
Match: RMLA_XANCB (Glucose-1-phosphate thymidylyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=rmlA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11 Identity = 50/185 (27.03%), Postives = 85/185 (45.95%), Query Frame = 1 Query: 154 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEP-FFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD 705 K +IL GG GTRL P+T V K L+ +KPMI + + L G+ ++++ + + L A+ G+ I + + P G A + RD + G+P VL ++ + + + A A++ V++P +YGV ++ GKV EKP+ N G+Y + D Sbjct: 5 KGIILAGGSGTRLYPITKGVSKQLLPVYDKPMIYYPLSVLMLAGIRDILIINTPHEQALFQSLLGDGAQWGVNIQYAVQPSPDGLAQAYLIGRDFV---GGKPSCLVLGDNIFHGHGLTDTLRRADAREQGATVFGYWVNDPERYGVAEFDQH-GKVIDIAEKPEKPRSNYAVTGLYFYDGKASD 185
BLAST of FC929820 vs. ExPASy Swiss-Prot
Match: EI2BG_MACFA (Translation initiation factor eIF-2B subunit gamma OS=Macaca fascicularis GN=EIF2B3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11 Identity = 40/137 (29.20%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 154 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTK 564 +A+++ G G+R+ LT S+PKPL+ NKP+I + + L+ VG EV++ +V EF+ K+ I+C + +GTA L KL D VL+ D+I++ E+++ +A+ ++++ K Sbjct: 4 QAVVMAVGGGSRMTDLTSSIPKPLLPAGNKPLIWYPLNLLERVGFEEVIVVTT--RDVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYMYPKLKTDV----LVLSCDLITDVALHEVVDLFRAYDASLAMLMRK 134 The following BLAST results are available for this feature:
BLAST of FC929820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929820 ID=FC929820; Name=FC929820; organism=Citrus clementina; type=EST; length=758bpback to top |