FC929836

Overview
NameFC929836
Unique NameFC929836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.958e-39
Identity = 89/235 (37.87%), Postives = 138/235 (58.72%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNM--SYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            +F  EI+ +  ++HPNLV + G      ++ L+Y Y+   +L    F  E S+  + W V  KI L +AR L++LHE+   K++HRDIK +N+LLD + N  +SDFGL+KL    ++H++T VAGT GY+APEYA+   ++ KADVYS+G+V LE++S K  +  S+    N    + WA  +   G   E+    L       +   ++ +AL CT  S S+RPTM + V +L+
Sbjct:  301 QFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQD--FIKERSKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLLK 533          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 6.475e-39
Identity = 90/236 (38.14%), Postives = 139/236 (58.90%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK---NNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSML 698
            EF  E+ ++  + H +LV + G C +GD L L+YEYME   L   +  G++S   L+W  R +I +  A+GL +LH   R  +VHRD+K TN+LL+     K++DFGL++    + ++H+ T VAGT GY+ PEY    +L+ K+DVYSFGVV LEIV+ +   N     P  N     +W   +  +G +  +VDP+L  +++     +++++AL C N S S RPTM  +V  L
Sbjct:  609 EFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENM-SGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRERPHIN-----EWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELALACVNPSSSRRPTMPHVVMEL 838          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.475e-39
Identity = 83/239 (34.73%), Postives = 135/239 (56.49%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNIP 719
            EF+NE+ ++S + H N+VK+ GCC+E    +LVYE++ N +L   L    +  +   W +R +I + IA  L++LH  +   I HRD+K+TN++LD     K+SDFG ++    + TH++T V+GT+GYM PEY      T K+DVYSFGVV +E+++G+ ++S++          +     +   L +++D R+       +     K+A  C N     RP+M E VSM   S  +P
Sbjct:  487 EFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSMRE-VSMELDSIRMP 724          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.475e-39
Identity = 90/234 (38.46%), Postives = 136/234 (58.12%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            EF  EI M+S L+H +LV + G C E  +++LVYEYM N  L   L+G +   L  +W  R +IC+G ARGL +LH  +   I+HRD+K TN+LLD +L  K++DFGL+K     ++TH+ST V G+ GY+ PEY     LT K+DVYSFGVV +E++  +  ++ V         +WA    + G L +++D  L  + N    ++  + A  C       RP+M +++  LE
Sbjct:  550 EFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPL--SWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLE 781          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.475e-39
Identity = 89/234 (38.03%), Postives = 134/234 (57.26%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            EF  EI ++S L+H +LV + G C EG ++ L+Y+YM   +L   L+  +  QL   W  R +I +G ARGL +LH  +++ I+HRD+K TN+LLD +   K+SDFGL+K        H++T V G+ GY+ PEY     LT K+DVYSFGVV  E++  +  ++           DWA +  R GTL +++DP L  + N    ++    A  C + S   RPTM +++  LE
Sbjct:  561 EFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQL--TWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVSLGDWAMNCKRKGTLEDIIDPNLKGKINPECLKKFADTAEKCLSDSGLDRPTMGDVLWNLE 792          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.456e-39
Identity = 84/233 (36.05%), Postives = 134/233 (57.51%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            +F+NE+ ++S + H N+VK+ GCC+E +  LLVYE++   SL   L G       L W  R +I + +A  +A+LH  +   I+HRDIK  N+LLD +L  K++DFG +KL   +K  ++T V GT+GY+ PEY     L  K+DVYSFGVV +E++SG+  + +         + +     +   L E++D ++ +E N+ E     ++A+ CT      RP M E+ + LE
Sbjct:  148 QFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVS-SLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMIEVAAELE 379          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 8.456e-39
Identity = 86/233 (36.91%), Postives = 133/233 (57.08%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            +F+NE+ ++S + H N+VK+ GCC+E +  LLVYE++ N +L   L G       L W  R KI + +A  LA+LH  +   I+HRDIK  N+LLD +L  K++DFG ++L   +K  + T V GT+GY+ PEY   G L  K+DVYSFGVV +E++SG+  + +    +    + +     +   L E++   + +E N  E +   +IA  CT      RP M E+ + LE
Sbjct:  449 QFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDS-SLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSSKHLVSYFATATKENRLDEIIGGEVMNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLE 680          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.456e-39
Identity = 85/235 (36.17%), Postives = 138/235 (58.72%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE--EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            EF  E+ ++  + H NLV + G C E D   L+YEYM N  L H    G++    LNW  R +I +  A GL +LH   +  +VHRD+K+TN+LLD +   KI+DFGL++  +   +++ +ST VAGT+GY+ PEY L   L+ K+DVYSFG++ LEI++ +  +    ++      +W   + + G   ++VDP+L   ++     R +++A+ C N S   RP MS+++  L+
Sbjct:  606 EFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDL-HQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENPNIA--EWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINLK 837          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.104e-38
Identity = 90/233 (38.63%), Postives = 130/233 (55.79%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            EF  EI M+S L+H +LV + G C E  +++LVYE+M N      L+G   +   L W  R +IC+G ARGL +LH  +   I+HRD+K+TN+LLD  L  K++DFGL+K     + H+ST V G+ GY+ PEY     LT K+DVYSFGVV LE +  +  ++           +WA    R G L +++DP L    N    ++  + A  C       RPTM +++  LE
Sbjct:  566 EFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYG--KNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLE 796          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.104e-38
Identity = 87/251 (34.66%), Postives = 139/251 (55.38%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK-----LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHI-STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNIPDVIPEA 737
            +F ++++++S L+H + V++ G C+E +  +L+Y++    SL   L G +  Q       LNW  R KI  G A+GL FLHE+ +  IVHRD++++NVLL  D   K++DF L     +    + STRV GT GY APEYA+ G +T K+DVYSFGVV LE+++G+  + +         + WA        + + +DP+L ++F      ++  +A LC       RP M+ +V  L+   N     PE+
Sbjct:  113 DFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPES 363          
The following BLAST results are available for this feature:
BLAST of FC929836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RPK1_ARATH4.958e-3937.87Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH6.475e-3938.14Probable LRR receptor-like protein kinase At1g5189... [more]
WAKLH_ARATH6.475e-3934.73Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
THE1_ARATH6.475e-3938.46Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
ANX2_ARATH6.475e-3938.03Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
WAKLS_ARATH8.456e-3936.05Putative wall-associated receptor kinase-like 16 O... [more]
WAK1_ARATH8.456e-3936.91Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
MEE39_ARATH8.456e-3936.17Probable LRR receptor-like serine/threonine-protei... [more]
Y4391_ARATH1.104e-3838.63Probable receptor-like protein kinase At4g39110 OS... [more]
Y2197_ARATH1.104e-3834.66Probable protein kinase At2g41970 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AG09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AG09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929836 ID=FC929836; Name=FC929836; organism=Citrus clementina; type=EST; length=761bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAATGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAAACTTGAGG
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