FC929836

Overview
NameFC929836
Unique NameFC929836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.104e-38
Identity = 86/233 (36.91%), Postives = 131/233 (56.22%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            EF+NE+ +++ + H N+VK+ GCC+E +  +LVYE++ N  L   L   E+    + W VR  I + IA  L++LH  + F I HRDIK TN+LLD     K+SDFG ++    ++TH++T+VAGT GY+ PEY      T K+DVYSFGVV +E+++G+   S V                +   ++++VD R+  E N  +   +  +A  C N     RP M E+   LE
Sbjct:  456 EFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHD-ESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNMREVSIELE 687          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.104e-38
Identity = 94/233 (40.34%), Postives = 134/233 (57.51%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSML 698
            F  E+  +  ++H N+V+  GCC   +  LL+Y+YM N SL  +L    +    L W VR KI LG A+GLA+LH +    IVHRDIKA N+L+  D  P I DFGLAKL D+ +    S  +AG+ GY+APEY     +T K+DVYS+GVV LE+++GK  +   +PD      +DW   +     + + +  R  SE    E  + + +ALLC N  P  RPTM ++ +ML
Sbjct:  836 FSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLG-SLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG--LHIVDWVKKIRDIQVIDQGLQARPESEVE--EMMQTLGVALLCINPIPEDRPTMKDVAAML 1063          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.442e-38
Identity = 93/236 (39.41%), Postives = 139/236 (58.90%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEEEKTHISTRVAGTIGYMAPEYALWGY-LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            +F  E+ +++  +HPNLV I G     D  LLV EY+ N +L   L   E S   L+W VR KI LG A+GLA+LH   R   +H ++K TN+LLD   NPKISDFGL++L   ++  T  + R    +GY+APE       +  K DVY FGV+ LE+V+G+  + Y  DS      D    +   G ++E +DP +  ++++ E   ++K+AL+CT+  PS RPTM+E+V +L+
Sbjct:  768 DFDREVRILAKAKHPNLVSIKGYFWTPDLHLLVSEYIPNGNLQSKLHEREPSTPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVEYGEDSFVILS-DHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCTSQIPSNRPTMAEIVQILQ 1002          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.442e-38
Identity = 87/234 (37.18%), Postives = 138/234 (58.97%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            +F+NE+ ++S + H N+VK+ GCC+E +  LLVYE++ + +L   L G       L W  R +I   +A  LA+LH  +   I+HRDIK  N+LLD++L  K++DFG ++L   +K  ++T V GT+GY+ PEY   G L  K+DVYSFGVV +E++SG+  + +    +C   L   F    ++    E++D ++ +E N+ E +   +IA  CT      RP M E+ + LE
Sbjct:  444 QFINEVLVLSQINHRNVVKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYDS-SLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCF-ERPHCPKNLVSCFASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPRMKEVAAELE 675          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.884e-38
Identity = 87/224 (38.84%), Postives = 132/224 (58.93%), Query Frame = 3
Query:   42 HPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA-----FHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSML 698
            HPNLV+++G C++G + +LV+EYM   SL   +      + KL W  R  I   +ARGL FLH E    IVHRD+KA+NVLLD+  N +++DFGLA+L     +H+ST +AGTIGY+APEY      T + DVYS+GV+ +E+ +G+  +    D    C ++WA      ++   G+ + L   + G+     +   ++KI + CT   P  RP M E+++ML
Sbjct:  872 HPNLVRLYGWCLDGSEKILVHEYMGGGSLEELI----TDKTKLQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAV----DGGEECLVEWARRVMTGNMTAKGSPITLSGTKPGN--GAEQMTELLKIGVKCTADHPQARPNMKEVLAML 1085          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.884e-38
Identity = 92/234 (39.32%), Postives = 132/234 (56.41%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            EF  EI M+S L+H +LV + G C E ++++LVYEYM N +L   LFG  ++   L+W  R + C+G ARGL +LH  S   I+HRD+K TN+LLD +   K+SDFGL+K     + TH+ST V G+ GY+ PEY     LT K+DVYSFGVV  E V  +  ++     +     +WA    +   L  ++D  L   ++    E+  +IA  C       RP M E++  LE
Sbjct:  560 EFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFG--SNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLE 791          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.884e-38
Identity = 92/239 (38.49%), Postives = 136/239 (56.90%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFG-----GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHI-STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            EFL +++M+S L+  N+V++ G CV+G   +L YEY  N SL   L G     G      L+W  R KI +G A+GL +LHE+++  I+HRDIK++N+LL  D   KI+DF L+    +    + STRV GT GY APEYA+ G L+ K+DVYSFGVV LE+++G+  + +         + WA        + + VD RL +++      +M  +A LC       RP MS +V  L+
Sbjct:  107 EFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVVKALQ 345          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.460e-38
Identity = 86/236 (36.44%), Postives = 147/236 (62.29%), Query Frame = 3
Query:    9 LNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKL-NWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPD-SNCTCPLDWA-FHLHRSGTLMELVDPRLGSEFNKV--EAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            L E+ ++  ++H N+V++ GCC   D  +L+YEYM N SL   L GG+ +      W    +I +G+A+G+ +LH +    IVHRD+K +N+LLD D   +++DFG+AKL + +++   + VAG+ GY+APEYA    +  K+D+YS+GV+ LEI++GK ++   P+       +DW    L     + E++D  +G   + +  E ++M++IALLCT+ SP+ RP M +++ +L+
Sbjct:  767 LAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES--MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVE--PEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQ 998          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.460e-38
Identity = 84/236 (35.59%), Postives = 137/236 (58.05%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK-LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDW--AFHLHRSGTLMELVDPRLG-SEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSML 698
            EF +EIA+++ ++H +LV + G C++G++ LLVYEYM   +L+  LF      LK L W  R  + L +ARG+ +LH  +    +HRD+K +N+LL  D+  K++DFGL +L  E K  I TR+AGT GY+APEYA+ G +T K DVYSFGV+ +E+++G+ ++           + W    ++++  +  + +D  +   E        + ++A  C    P  RP M   V++L
Sbjct:  630 EFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSWFKRMYINKEASFKKAIDTTIDLDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNIL 865          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.213e-38
Identity = 85/234 (36.32%), Postives = 139/234 (59.40%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            +F  E+ ++  + H NLV + G C EG  L+L+YEYM N +L   L  GENS+  L+W  R +I    A+GL +LH   +  ++HRDIK+ N+LLD +   K+ DFGL++      +TH+ST VAG+ GY+ PEY    +LT K+DV+SFGVV LEI++ +  +    + +     +W      +G +  +VDP +  +++     + +++A+ C + S S RP MS++ + L+
Sbjct:  631 QFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHL-SGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIG--EWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQ 861          
The following BLAST results are available for this feature:
BLAST of FC929836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLB_ARATH1.104e-3836.91Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
RCH1_ARATH1.104e-3840.34LRR receptor-like serine/threonine-protein kinase ... [more]
Y3804_ARATH1.442e-3839.41Probably inactive leucine-rich repeat receptor-lik... [more]
WAK2_ARATH1.442e-3837.18Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
Y1743_ARATH1.884e-3838.84Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH1.884e-3839.32Probable receptor-like protein kinase At1g30570 OS... [more]
PTI1_SOLLC1.884e-3838.49Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y5148_ARATH2.460e-3836.44Probable leucine-rich repeat receptor-like protein... [more]
TMK1_ARATH2.460e-3835.59Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y4245_ARATH3.213e-3836.32Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AG09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AG09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929836 ID=FC929836; Name=FC929836; organism=Citrus clementina; type=EST; length=761bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAATGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAAACTTGAGG
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