FC929836

Overview
NameFC929836
Unique NameFC929836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 99/237 (41.77%), Postives = 145/237 (61.18%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKI---ALLCTNASPSLRPTMSEMVSMLE 701
            F  E+  +  ++H N+V+  GCC   +  LL+Y+YM N SL   L     S L  +W +R +I LG A+GLA+LH +    IVHRDIKA N+L+  D  P I+DFGLAKL DE +    S  VAG+ GY+APEY     +T K+DVYS+GVV LE+++GK  +   VP+      +DW   + ++   +E++D  L S   + EA+ M+++   ALLC N+SP  RPTM ++ +ML+
Sbjct:  836 FSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSL--DWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEG--IHLVDW---VRQNRGSLEVLDSTLRSR-TEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLK 1064          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 96/240 (40.00%), Postives = 139/240 (57.92%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHR-------SGTLMELVDPRLG-SEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSML 698
            EF  E+  I  ++H N+V +HG  +     LL Y+YMEN SL   L G    ++KL+W  R KI +G A+GLA+LH +   +I+HRDIK++N+LLD +    +SDFG+AK     KTH ST V GTIGY+ PEYA    +  K+D+YSFG+V LE+++GK              +D   +LH+         T+ME VDP +  +  +     +  ++ALLCT  +P  RPTM E+  +L
Sbjct:  688 EFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLK-KVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKK------------AVDNEANLHQLILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERPTMLEVSRVL 914          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 97/238 (40.76%), Postives = 144/238 (60.50%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIS-TRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK--NNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERM--IKIALLCTNASPSLRPTMSEMVSMLE 701
            EF  E+  I  ++H NLV + G C  G++ LLVYEYM+  SL   L   + + +KLNWP R+KI +G ARGLAFLH      I+HRD+K++NVLLD +L  ++SDFG+A+L     TH+S + +AGT GY+ PEY      + K DVYS+GVV LE+++GK   + +   D+N    + W   LH  G + ++ D  L  E   +E E +  +K+A  C +     RPTM ++++M +
Sbjct:  928 EFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNNL---VGWV-KLHAKGKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTMIQVMAMFK 1161          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.541e-40
Identity = 90/234 (38.46%), Postives = 137/234 (58.55%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            +F  E+ ++  + H NLV + G C EGD+L L+YEYM N  L   + G     + LNW  R KI L  A+GL +LH   +  +VHRD+K TN+LL+   + K++DFGL++    E +TH+ST VAGTIGY+ PEY    +LT K+DVYSFGVV L +++ +  +    +       +W   +   G +  + DP L  ++N     + +++A+ C N S   RPTMS++V  L+
Sbjct:  617 QFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSI-LNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNREKRHIA--EWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVVFELK 847          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.541e-40
Identity = 86/233 (36.91%), Postives = 131/233 (56.22%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            EF  E+ ++S  +H NLV + G CV     +L+Y +MEN SL + L        +L+WP R  I  G + GLA++H+     IVHRDIK++N+LLD +    ++DFGL++L    +TH++T + GT+GY+ PEY      T + DVYSFGVV LE+++GK  M           + W   + R G   E+ D  L    N+    R++ IA +C N +P  RP + ++V  L+
Sbjct:  843 EFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRPKMSRELVAWVHTMKRDGKPEEVFDTLLRESGNEEAMLRVLDIACMCVNQNPMKRPNIQQVVDWLK 1075          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.541e-40
Identity = 96/240 (40.00%), Postives = 139/240 (57.92%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFG-GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRL-GSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNIP 719
            F  E+ ++  ++H  LV + G C      LL+Y+Y+   SL  AL   GE    +L+W  R  I +G A+GL++LH +   +I+HRDIK++N+LLD +L  ++SDFGLAKL E+E++HI+T VAGT GY+APEY   G  T K DVYSFGV+ LE++SGK              + W   L       ++VDP   G +   ++A  ++ IA  C + SP  RPTM  +V +LE     P
Sbjct:  347 FERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERGE----QLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNCEGMQMESLDA--LLSIATQCVSPSPEERPTMHRVVQLLESEVMTP 580          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.013e-40
Identity = 91/237 (38.40%), Postives = 138/237 (58.23%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK----LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLE 701
            EF  EI M+S L+H +LV + G C E  +++LVYEYM N  L   L+G + +       L+W  R +IC+G ARGL +LH  +   I+HRD+K TN+LLD +L  K+SDFGL+K    ++ H+ST V G+ GY+ PEY     LT K+DVYSFGVV  E++  +  ++           ++A +LHR G L +++DP++    +K    + ++ A  C       RP M +++  LE
Sbjct:  565 EFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLE 801          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.629e-40
Identity = 98/254 (38.58%), Postives = 144/254 (56.69%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE---EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN-NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSML-EGSSNIPDVIPEAGGLSE 752
            F  E+  +  ++H ++V++  CC  GD  LLVYEYM N SLA  L G     + L WP R +I L  A GL++LH +    IVHRD+K++N+LLD D   K++DFG+AK+ +    +     + +AG+ GY+APEY     +  K+D+YSFGVV LE+V+GK    S + D +      W         L  ++DP+L  +F K E  ++I I LLCT+  P  RP+M ++V ML E S  +P   P     S+
Sbjct:  734 FAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDKDMA---KWVCTALDKCGLEPVIDPKLDLKF-KEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGAVPCSSPNTSKRSK 983          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.629e-40
Identity = 99/242 (40.91%), Postives = 143/242 (59.09%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFG-GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK--NNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRL-GSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNIP 719
            F  E+ ++  ++H  LV + G C      LL+Y+Y+   SL  AL   GE    +L+W  R  I +G A+GLA+LH +   +I+HRDIK++N+LLD +L  ++SDFGLAKL E+E++HI+T VAGT GY+APEY   G  T K DVYSFGV+ LE++SGK   + S++        + W   L       E+VD    G E   ++A  ++ IA  C ++SP  RPTM  +V +LE     P
Sbjct:  345 FERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHKRGE----QLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNI--VGWLNFLISENRAKEIVDLSCEGVERESLDA--LLSIATKCVSSSPDERPTMHRVVQLLESEVMTP 578          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.629e-40
Identity = 97/238 (40.76%), Postives = 143/238 (60.08%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIS-TRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK--NNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERM--IKIALLCTNASPSLRPTMSEMVSMLE 701
            EF  E+  I  ++H NLV + G C  G++ LLVYEYM+  SL   L   +   +KLNWP R+KI +G ARGLAFLH      I+HRD+K++NVLLD +L  ++SDFG+A+L     TH+S + +AGT GY+ PEY      + K DVYS+GVV LE+++GK   + +   D+N    + W   LH  G + ++ D  L  E   +E E +  +K+A  C +     RPTM ++++M +
Sbjct:  928 EFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNNL---VGWV-KLHAKGKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTMIQVMAMFK 1161          
The following BLAST results are available for this feature:
BLAST of FC929836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RCH2_ARATH1.180e-4041.77Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
ERL1_ARATH1.180e-4040.00LRR receptor-like serine/threonine-protein kinase ... [more]
BRI1_SOLPE1.180e-4040.76Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
Y5181_ARATH1.541e-4038.46Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH1.541e-4036.91Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
FEI1_ARATH1.541e-4040.00LRR receptor-like serine/threonine-protein kinase ... [more]
Y5613_ARATH2.013e-4038.40Probable receptor-like protein kinase At5g61350 OS... [more]
RLK5_ARATH2.629e-4038.58Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
FEI2_ARATH2.629e-4040.91LRR receptor-like serine/threonine-protein kinase ... [more]
BRI1_SOLLC2.629e-4040.76Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AG09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AG09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929836 ID=FC929836; Name=FC929836; organism=Citrus clementina; type=EST; length=761bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAATGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAAACTTGAGG
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