FC929838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_ECO24 (Glycogen synthase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSI (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=SSII-3 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 332 AD +++PSRFEPCGL QL+AM YGTVP+V + GGL DTV F F+ + +P + + L TY ++ + GM+QDLSW A+ +EE L+ Sbjct: 699 ADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTV-SAFDPFEDTGLGWTFDRAEP---HKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLV 804
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_PSEPK (Glycogen synthase OS=Pseudomonas putida (strain KT2440) GN=glgA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSW 296 +DF+L+PSR+EPCGL Q++A R+G++P+ +TGGL DT+E G TGF +V+ + + RA YG + L M+ M Q +W Sbjct: 410 SDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIECGVTGFLFNESTVE----------SYREALSRAFYVYGKKDLLNAMRCLSMTQPFNW 496
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_FLAJ1 (Glycogen synthase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=glgA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV--DPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 323 +D+IL+PSR EPCGL Q++AMRYGT+PIV TGGL DTV + F D + D V + ++ RA+ Y + + +++ GMA D SW+ +++ E Sbjct: 366 SDYILMPSRVEPCGLNQMYAMRYGTIPIVRRTGGLRDTVID---------FGDDGNGICHDQASVGDICYSINRAVKLYDDKISFNTVLRRGMAADHSWERVCQEYIE 464
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_CHLMU (Glycogen synthase OS=Chlamydia muridarum GN=glgA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 239 AD I IPS FEPCGL Q+ MRYGTVP+V +TGGL DTV +G GF SFS +P D + +A+ATY Sbjct: 373 ADMICIPSMFEPCGLTQMIGMRYGTVPVVRATGGLADTVTDGVNGF---SFS------NPHDFHEFRNMLSKAIATY 440
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_SYNP6 (Glycogen synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 323 +D L+PSRFEPCG+ Q+ A+RYG+VPIV TGGLVDTV G+ + +P+D + T + RA +Y Q ++ + GMA DLSWK A +E+ Sbjct: 348 SDAFLVPSRFEPCGITQMLALRYGSVPIVRRTGGLVDTVFHHDPRHAEGN-GYCFDRYEPLD---LYTCLVRAWESYQYQPQWQKLQQRGMAVDLSWKQSAIAYEQ 449
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_SYNE7 (Glycogen synthase OS=Synechococcus elongatus (strain PCC 7942) GN=glgA PE=3 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 323 +D L+PSRFEPCG+ Q+ A+RYG+VPIV TGGLVDTV G+ + +P+D + T + RA +Y Q ++ + GMA DLSWK A +E+ Sbjct: 348 SDAFLVPSRFEPCGITQMLALRYGSVPIVRRTGGLVDTVFHHDPRHAEGN-GYCFDRYEPLD---LYTCLVRAWESYQYQPQWQKLQQRGMAVDLSWKQSAIAYEQ 449
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_SHISS (Glycogen synthase OS=Shigella sonnei (strain Ss046) GN=glgA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDNNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_RHOCS (Glycogen synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=glgA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 38/106 (35.85%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 323 AD +L+PSRFEPCGL Q++A+RYG +P+V+ GGL DTV + T + S +PV + + + RA A + L + +N M +D+ W A+ + + Sbjct: 387 ADVLLVPSRFEPCGLTQMYALRYGALPLVSRVGGLADTVTD-VTESSLADGSATGFVFEPVGLMPLIHAMERAAALWRRPDLWRTVQRNAMGRDVGWAASARHYAD 491
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_MOOTA (Glycogen synthase OS=Moorella thermoacetica (strain ATCC 39073) GN=glgA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ--ALAEMMKNGMAQDLSWKGPAKKWEE 323 D L+PSRFEPCGL Q+ ++RYG VP+V +TGGL DT+++ + G G D + A+ T+ RAL Y + ++M+ GMA D SW A +EE Sbjct: 369 DIFLMPSRFEPCGLGQMISLRYGAVPVVRATGGLEDTIKDLHQYPGVGNGFTFRDYQP------QALLDTINRALHVYRHEPGEWRKLMRRGMAADFSWSASAGHYEE 470 The following BLAST results are available for this feature:
BLAST of FC929838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929838 ID=FC929838; Name=FC929838; organism=Citrus clementina; type=EST; length=707bpback to top |