FC929838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_RHOS4 (Glycogen synthase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=glgA PE=3 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 36/100 (36.00%), Postives = 53/100 (53.00%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPA 308 D +L+PSRFEPCGL Q++ +RYG +P+VA TGGL DT+ M + P + A + +RR + Y A E + +N M + W+ A Sbjct: 368 DAVLVPSRFEPCGLTQMYGLRYGAIPVVALTGGLADTIINA-NPAAMAAGCATGLTFHPTEPPAFAEALRRLIHLYADPAAWETVQRNAMRHPVGWETSA 466
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_PROM5 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9515) GN=glgA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 52/142 (36.62%), Postives = 70/142 (49.30%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 413 +D L+PSRFEPCG+ QL AMRYG++PIV GGLVDTV TGF F +P+D + VR A + + M+Q+ SW+ A ++E L+ +V G EP D EI + A P Sbjct: 348 SDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNCGTGFCFDRF-------EPIDF--YTALVRSWEAFRHKDSWKLLQIRAMSQEFSWQRSALEYE--LMYKDVCGIKEPSPDITEIEKFSYGQSADP 478
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_PELCD (Glycogen synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=glgA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEE 323 +D L+PS +EPCGL QL A+RYG+VP+V TGGL DTV + Q + + + +A+ + RALA Y + ++++ GM D SW+ A ++ E Sbjct: 372 SDMFLMPSHYEPCGLGQLIALRYGSVPVVRKTGGLADTVFDP----QDQATQANGFTFREISPSAMLAALDRALALYRQPEGWKQLVRRGMQGDFSWRQSALRYVE 473
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_THEAB (Glycogen synthase OS=Thermosipho africanus (strain TCF52B) GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 317 +D L+PSR+EPCGL Q++++RYGT+P+V TGGL DTV EE G G D A + V RA+ + + ++++N M DLSW+ A ++ Sbjct: 373 SDMFLMPSRYEPCGLGQMYSLRYGTIPVVRYTGGLADTVMEYDEEAMKGNGFG--------FKEYDSAYLLKAVARAVDFFKNKKGHWKKLIENAMKTDLSWERSANEY 473
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_NOSP7 (Glycogen synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKW 317 D L+PSRFEPCG+ Q+ ++RYG+VPIV TGGLVDTV G+ + +P+D + T + RA + + E+ K GM++D SW AK++ Sbjct: 349 DAFLMPSRFEPCGISQMMSLRYGSVPIVRRTGGLVDTVSHHDPENAAGT-GYCFDRYEPLD---LFTCMIRAWEGFRFKPQWQELQKRGMSEDFSWYKSAKEY 447
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_ERWT9 (Glycogen synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 41/111 (36.94%), Postives = 58/111 (52.25%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 323 AD IL+PSRFEPCGL QL+A++YGT+P+V TGGL DTV E G G D A ++ +RR+ + +L + + M D SW+ A + + Sbjct: 367 ADVILVPSRFEPCGLTQLYALKYGTLPLVRRTGGLADTVNDCSLENLADGIASGFSFEDSNA------WSLLRAIRRSFVLWSRPSLWRYVQRQAMGMDFSWQVAAVAYRD 471
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA_BACC1 (Glycogen synthase OS=Bacillus cereus (strain ATCC 10987) GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 338 +D L+PS FEPCGL QL A+ YGT+PIV TGGL DTV+ + TG G + A D + TVRRA+ Y + + E ++K M +D SW A +++ +L Sbjct: 368 SDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVRRAIEFYHDKPVWEQLVKQAMTEDYSWGKSALAYKKLYKSL 474
BLAST of FC929838 vs. ExPASy Swiss-Prot
Match: GLGA1_BRAJA (Glycogen synthase 1 OS=Bradyrhizobium japonicum GN=glgA1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 38/97 (39.18%), Postives = 54/97 (55.67%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSW 296 +DF L+PSRFEPCGL Q++A R+G++PI TGGL +T+ +G TGF S + + VRRA + Q L M ++ M + SW Sbjct: 359 SDFTLMPSRFEPCGLSQMYAQRFGSLPIGHQTGGLAETITDGETGFLFSRPSHE----------SFLGGVRRAFEAFMAQDQLDSMRRSAMGRSFSW 445 The following BLAST results are available for this feature:
BLAST of FC929838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929838 ID=FC929838; Name=FC929838; organism=Citrus clementina; type=EST; length=707bpback to top |