FC929852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_STAAR (Thioredoxin reductase OS=Staphylococcus aureus (strain MRSA252) GN=trxB PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24 Identity = 68/170 (40.00%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 + IIG+GP LK ++ E + PGGQ+ T +VENFPGF I G DL + + +FG + V+ K + +K + A VI+ATGA KK+ PG RG+S CAVCDGA F++K L VIGGGDSA+EE FLTK+ K Sbjct: 8 IAIIGAGPAGMTAAVYASRANLKTVMIERGI-----PGGQMANTEEVENFPGFEM-ITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA--FFKNKRLFVIGGGDSAVEEGTFLTKFADK 169
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_STAAN (Thioredoxin reductase OS=Staphylococcus aureus (strain N315) GN=trxB PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24 Identity = 68/170 (40.00%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 + IIG+GP LK ++ E + PGGQ+ T +VENFPGF I G DL + + +FG + V+ K + +K + A VI+ATGA KK+ PG RG+S CAVCDGA F++K L VIGGGDSA+EE FLTK+ K Sbjct: 8 IAIIGAGPAGMTAAVYASRANLKTVMIERGI-----PGGQMANTEEVENFPGFEM-ITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA--FFKNKRLFVIGGGDSAVEEGTFLTKFADK 169
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_STAAM (Thioredoxin reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=trxB PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24 Identity = 68/170 (40.00%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 + IIG+GP LK ++ E + PGGQ+ T +VENFPGF I G DL + + +FG + V+ K + +K + A VI+ATGA KK+ PG RG+S CAVCDGA F++K L VIGGGDSA+EE FLTK+ K Sbjct: 8 IAIIGAGPAGMTAAVYASRANLKTVMIERGI-----PGGQMANTEEVENFPGFEM-ITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA--FFKNKRLFVIGGGDSAVEEGTFLTKFADK 169
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_STAAC (Thioredoxin reductase OS=Staphylococcus aureus (strain COL) GN=trxB PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24 Identity = 68/170 (40.00%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 + IIG+GP LK ++ E + PGGQ+ T +VENFPGF I G DL + + +FG + V+ K + +K + A VI+ATGA KK+ PG RG+S CAVCDGA F++K L VIGGGDSA+EE FLTK+ K Sbjct: 8 IAIIGAGPAGMTAAVYASRANLKTVMIERGI-----PGGQMANTEEVENFPGFEM-ITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA--FFKNKRLFVIGGGDSAVEEGTFLTKFADK 169
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_SPIBA (Thioredoxin reductase (Fragment) OS=Spironucleus barkhanus GN=TRXB PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24 Identity = 65/170 (38.24%), Postives = 98/170 (57.65%), Query Frame = 1 Query: 181 IIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT--DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 I+G GP L P++F G I QL TT++VEN+PGF + I G DL+ +Q+ G Q+F E V+K+D +RPFK+ +++ + D +I ATG+ A++L G FW +G+SACAVCD + + ++K V+GGGD A EE+ +L+ SK Sbjct: 3 IVGGGPGGLAAAIYAGRAGLTPVIFLG-----IETSSQLMTTTEVENYPGF-KTIQGPDLVQNQVDQAEHCGAQLFYEDVTKIDATARPFKITHGYENEIMTCDALIFATGSTAQRLDVIGEKQFWQKGVSACAVCD--SMMAKNKDTVVVGGGDVACEEASYLSNIASK 164
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_LISIN (Thioredoxin reductase OS=Listeria innocua GN=trxB PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24 Identity = 67/171 (39.18%), Postives = 97/171 (56.73%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 V IIG+GP +L ++ E + PGGQ+ T++VEN+PGF ILG DL D+ + + +FG + + +V + FK T SK+ A +I+ATGA +KL G + RG+S CAVCDGA F+++ L V+GGGDSA+EE +LT+Y K Sbjct: 10 VIIIGAGPAGMTAALYTSRADLDTLMIERGV-----PGGQMVNTAEVENYPGF-DSILGPDLSDKMLSGAKQFGAEYAYGDIKEV-IDGKEFKTVTAGSKTYKARAIIIATGAEHRKLGAAGEEELSGRGVSYCAVCDGA--FFKNRELVVVGGGDSAVEEGTYLTRYADK 171
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_LISMO (Thioredoxin reductase OS=Listeria monocytogenes GN=trxB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.717e-24 Identity = 67/171 (39.18%), Postives = 97/171 (56.73%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 V IIG+GP +L ++ E + PGGQ+ T++VEN+PGF ILG DL D+ + + +FG + + +V + FK T SK+ A +I+ATGA +KL G + RG+S CAVCDGA F+++ L V+GGGDSA+EE +LT+Y K Sbjct: 10 VIIIGAGPAGMTAALYTSRADLDTLMIERGV-----PGGQMVNTAEVENYPGF-DSILGPDLSDKMLSGAKQFGAEYAYGDIKEV-VDGKEFKTVTAGSKTYKARAIIIATGAEHRKLGAAGEEELSGRGVSYCAVCDGA--FFKNRELIVVGGGDSAVEEGTYLTRYADK 171
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_BACSU (Thioredoxin reductase OS=Bacillus subtilis GN=trxB PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23 Identity = 67/171 (39.18%), Postives = 93/171 (54.39%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVF-TDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 V IIG+GP L ++ E + PGGQ+ T DVEN+PGF + ILG +L ++ + +FG + + +V + +KV SK A VI+A GA KK+ PG RG+S CAVCDGA F+ K L V+GGGDSA+EE +LT++ SK Sbjct: 9 VIIIGAGPAGMTAAVYTSRANLSTLMIERGI-----PGGQMANTEDVENYPGF-ESILGPELSNKMFEHAKKFGAEYAYGDIKEV-IDGKEYKVVKAGSKEYKARAVIIAAGAEYKKIGVPGEKELGGRGVSYCAVCDGA--FFKGKELVVVGGGDSAVEEGVYLTRFASK 170
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_BUCBP (Thioredoxin reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trxB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 61/172 (35.47%), Postives = 99/172 (57.56%), Query Frame = 1 Query: 172 KVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKS-VLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 K+ I+GSGP L+P+LF G N+ GGQL T+++EN+PG + + G +LM+R N + T+I + +V+F PF + +D+ +D+VI+ATGA K L F +G+S CAVCDG ++++ +AV+GGG++A+EE+ +L+ K Sbjct: 12 KLIILGSGPAGYTAAIYSARANLEPLLFTG---NN--KGGQLINTNEIENWPGDSKSLTGLELMERMHNHAKSLNTKIIPNEIIRVNFFKIPFLLVSDTNQYYTSDSVIIATGASPKYLGLTSESKFIGKGVSVCAVCDGF--FYKNEDVAVVGGGNTALEEALYLSNIARK 176
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_HELPY (Thioredoxin reductase OS=Helicobacter pylori GN=trxB PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22 Identity = 61/170 (35.88%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 181 IIGSGPXXXXXXXXXXXXELK-PILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 IIG GP +K +LFE M PGGQ+T +S++EN+PG + + G D M + Q RFG + V +V K F + D K+ A +VI+ATG K+ G +W +G+S CA CDG +++K +AV+GGGD+A+EE+ +L K Sbjct: 6 IIGGGPAGLSAGLYATRGGVKNAVLFEKGM-----PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGF--FYKNKEVAVLGGGDTAVEEAIYLANICKK 168 The following BLAST results are available for this feature:
BLAST of FC929852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929852 ID=FC929852; Name=FC929852; organism=Citrus clementina; type=EST; length=704bpback to top |