FC929852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_HELPJ (Thioredoxin reductase OS=Helicobacter pylori J99 GN=trxB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21 Identity = 60/170 (35.29%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 181 IIGSGPXXXXXXXXXXXXELK-PILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 IIG GP +K +LFE M PGGQ+T +S++EN+PG + + G D M + Q RFG + + +V K F + D K+ A +VI+ATG K+ G +W +G+S CA CDG +++K +AV+GGGD+A+EE+ +L K Sbjct: 6 IIGGGPAGLSAGLYATRGGVKNAVLFEKGM-----PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAIQRVSKKGSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGF--FYKNKEVAVLGGGDTAVEEAIYLANICKK 168
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_AQUAE (Thioredoxin reductase OS=Aquifex aeolicus GN=trxB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 60/174 (34.48%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSKFIY 693 V IIG+GP K ++ A+ G L T +EN+PG P + G +L+ R Q+ FG + V D S P KV+T D + T+IVA+GA+ + +F G + F RG+S C VCD A F+D+P+AVIG D A+EE+ F+ ++ +K + Sbjct: 15 VIIIGAGPAGTTAAIYTARAGWKTLVLYRAEAD-----GALGVTQKIENYPGVPGPLSGYELLKIMREQAKSFGAEFVRGKVIATDLNSDPKKVYTIDGREFRGKTIIVASGAMERANKFKGEEEFLGRGVSYCGVCDAA--FFKDQPVAVIGDDDYAIEEAEFIARFANKVFF 181
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_TREPA (Thioredoxin reductase OS=Treponema pallidum GN=trxB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21 Identity = 58/166 (34.94%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTK 672 V I+G+G L+ ++ E A GGQ +EN+PG+ I G + + + Q++ FG QI E V+ + + F + T + + A +VI+ATGA +K+ PG F RG+S CA CDG P FR+K + VIGGGD+A +ES L++ Sbjct: 7 VIIVGAGAAGLSAAQYACRANLRTLVIESK-----AHGGQALLIDSLENYPGYATPISGFEYAENMKKQAVAFGAQIAYEEVTTIGKRDSVFHITTGTGAYTAMSVILATGAEHRKMGIPGESEFLGRGVSYCATCDG--PFFRNKHVVVIGGGDAACDESLVLSR 165
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_CLOLI (Thioredoxin reductase OS=Clostridium litorale GN=trxB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.022e-20 Identity = 64/171 (37.43%), Postives = 84/171 (49.12%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVL-ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 + IIGSGP ++K +L EG GGQ+ T +V N+PG G L+ R Q FG + + + VDF + KV +K A VIVATGA K PG +G+S CA CD A F D + VIGGGD+A+EE+ FLTK+ K Sbjct: 7 IAIIGSGPAGLAAALYGARAKMKTLLLEGMKV-----GGQIVITHEVANYPGSVPEATGPSLIGRMEEQVEEFGAERVMDNIVDVDFTDK-IKVLKGAKGEYKAKAVIVATGASPKLAGCPGEKELTGKGVSYCATCD--ADFFEDMEVFVIGGGDTAVEEAMFLTKFARK 169
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_EUBAC (Thioredoxin reductase OS=Eubacterium acidaminophilum GN=trxB PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 55/170 (32.35%), Postives = 84/170 (49.41%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 + IIGSGP ++K I+ EG GGQ+ T +V N+PG + G L++R Q+ FG + + + VD + + + A +VI+ATGA + PG +G+S CA CD A F D + V+GGGD+A+EE+ +L K+ K Sbjct: 7 LAIIGSGPAGLAAALYGARAKMKTIMIEGQKV-----GGQIVITHEVANYPGSVREATGPSLIERMEEQANEFGAEKVMDKIVDVDLDGKIKVIKGEKAEYKAKSVILATGAAPRLAGCPGEQELTGKGVSYCATCD--ADFFEDMEVFVVGGGDTAVEEAMYLAKFARK 169
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_MYCPN (Thioredoxin reductase OS=Mycoplasma pneumoniae GN=trxB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 57/165 (34.55%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVL-ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFL 666 V I+G+GP L + EG PGG++ T+ VEN+PG+ + I G DL N + F + K+D + F ++ D K+V+ A TVI ATG + +KL D F+ +GIS CA+CDG+ +++D+ + V+GGG+SA++E+ +L Sbjct: 18 VAIVGAGPAGIAAGIYGKRANLNLAIIEG-----STPGGKVVKTNIVENYPGY-KSITGPDLGLEMYNHLIDLEPTFFYANLIKLDKAADTFILYLDDKTVVFAKTVIYATGMLERKLGVAKEDHFYGKGISYCAICDGS--LYKDQVVGVVGGGNSAIQEALYL 174
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_MYCGE (Thioredoxin reductase OS=Mycoplasma genitalium GN=trxB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 57/164 (34.76%), Postives = 90/164 (54.88%), Query Frame = 1 Query: 181 IIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKS-VLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLT 669 I+G+GP L + EG PGG++ T+ VEN+PGF + I G +L N L F +F + K+D + F ++ D+K+ V + TVI ATG +KL D F+ +GIS CA+CD A +++ K + V+GGG+SA++E+ +L+ Sbjct: 20 IVGAGPAGIASAIYGKRANLNLAIIEG-----NTPGGKIVKTNIVENYPGF-KTITGPELGLEMYNHLLAFEPVVFYNNLIKIDHLNDTFILYLDNKTTVFSKTVIYATGMEERKLGIEKEDYFYGKGISYCAICDAA--LYKGKTVGVVGGGNSAIQEAIYLS 175
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_UREPA (Thioredoxin reductase OS=Ureaplasma parvum GN=trxB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.508e-18 Identity = 55/162 (33.95%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 181 IIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFL 666 IIG+GP L I+ E PGG++ TS+VEN+ G I G +L + Q L I E ++ K + K+ +++++ TVI+ATG ++L G F N+GIS CA+CDG P++++K ++VIG G+SA+EE+ +L Sbjct: 10 IIGAGPAGLAAAVYAKRSGLNVIIVEKQF-----PGGKIALTSNVENYLGI-NSIPGPELAYKMYEQVLNLNVSIIYEAADEISLKEKYKKIKLTTQTLITKTVIIATGTENRRLNILGELEFENKGISYCAICDG--PLYKNKAVSVIGSGNSAVEEAIYL 163
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: TRXB_MYCPU (Thioredoxin reductase OS=Mycoplasma pulmonis GN=trxB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.772e-16 Identity = 59/173 (34.10%), Postives = 89/173 (51.45%), Query Frame = 1 Query: 175 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI-FTETVSKVDFKSRPFK-VFTDSKSVLADTVIVATGAVAKK-LQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKYGSK 684 V IIG+GP L + + + APGG+L S +EN+PG + G DL R + FG + + + V ++ K + V D K + A +VI+A+G V++K + D F NRG+S C +CDG P++ P +IGGG+SA+EE FL+ SK Sbjct: 9 VAIIGAGPGALTAAIYTSRGNLDTVFID-----NAAPGGKLIYASKIENWPG-DTIVKGTDLAIRFFEHAQAFGAKYEYGKVVDLINIKDDLKELVLEDGKKIQAKSVIIASGMVSRKPREILNYDEFENRGVSYCVICDG--PMYGHNPAIIIGGGNSAVEEGTFLSSIASK 173
BLAST of FC929852 vs. ExPASy Swiss-Prot
Match: R34K_CLOPA (34.2 kDa protein in rubredoxin operon OS=Clostridium pasteurianum PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16 Identity = 54/166 (32.53%), Postives = 81/166 (48.80%), Query Frame = 1 Query: 181 IIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFT-ETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEESHFLTKY 675 IIG+GP +L ++ E + GGQ+ T VENFPGF I G DL D+ + G I + K+ + T+ +I+ATGA +++L P + + I C +CDGA +++ K L V+GGG+SA+E + FLTKY Sbjct: 11 IIGAGPAGLTAAIYAIRAKLNTLVLENELV-----GGQIRETYTVENFPGF-NVISGADLADKMEEHAASIGVNIDQFSNIEKIKLSDDEKIIETEDVIYKVKALIIATGAKSRRLPIPEEEKLHGKVIHYCELCDGA--LYQGKDLVVVGGGNSAVEAAIFLTKY 168 The following BLAST results are available for this feature:
BLAST of FC929852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929852 ID=FC929852; Name=FC929852; organism=Citrus clementina; type=EST; length=704bpback to top |