FC929854

Overview
NameFC929854
Unique NameFC929854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_LACLM (Bifunctional protein folD OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=folD PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.555e-52
Identity = 109/215 (50.70%), Postives = 145/215 (67.44%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMIK 716
            +IDGKA+A  +++E+  +V  L E  G VPGLAV++VG    SQ YV  K +    +G+ S  + LPE VSE EL+  + + N     HGILVQLPLPKHI+EEKVL  I  EKDVDGFHP+N+G+L     +PL +P TP G +E+ +   V + GKRAVV+GRSNIVG P++ LL+ ADATVTI HS T +   + +EADI++ A G+  MIK
Sbjct:    3 LIDGKALAAKMQAELKVKVDKLKEA-GSVPGLAVILVGEDPASQIYVRNKARQATAIGLNSSVVRLPETVSEKELLELIEQYNQSEQWHGILVQLPLPKHISEEKVLLAIDPEKDVDGFHPMNMGRL--WAGNPLMIPSTPAGIMEMFREYNVELSGKRAVVIGRSNIVGKPMAQLLMMADATVTIAHSRTKNLRELTKEADILVVAIGRDRMIK 214          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRPZ (Bifunctional protein folD OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=folD PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRPM (Bifunctional protein folD OS=Streptococcus pyogenes serotype M28 GN=folD PE=3 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRPG (Bifunctional protein folD OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=folD PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRPF (Bifunctional protein folD OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=folD PE=3 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRPD (Bifunctional protein folD OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=folD PE=3 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRPC (Bifunctional protein folD OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=folD PE=3 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRPB (Bifunctional protein folD OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=folD PE=3 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRP8 (Bifunctional protein folD OS=Streptococcus pyogenes serotype M18 GN=folD PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRP6 (Bifunctional protein folD OS=Streptococcus pyogenes serotype M6 GN=folD PE=3 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
The following BLAST results are available for this feature:
BLAST of FC929854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_LACLM4.555e-5250.70Bifunctional protein folD OS=Lactococcus lactis su... [more]
FOLD_STRPZ7.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPM7.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPG7.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPF7.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPD7.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPC7.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPB7.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRP87.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRP67.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]

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Properties
Property NameValue
Genbank descriptionC34001B06EF PostHarvC1 Citrus clementina cDNA clone C34001B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929854 ID=FC929854; Name=FC929854; organism=Citrus clementina; type=EST; length=717bp
GGAGCAATTAATTAGAGTTATCCATCTCTAGTTCTAGAATAATGGCGGCA
CCGTCAGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGAC
CATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATG
GCAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCT
CAAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAA
GTCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCA
GCAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTT
CAACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGAT
AAGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGC
TCGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGA
TGCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGC
TGTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGC
TGCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGAT
CCTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACA
AAGCATGATGATCAAGG
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